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Sym­bio­sis De­part­ment - Pu­bli­ca­ti­ons

 

Pu­bli­ca­ti­ons of mem­bers of the Sym­bio­sis De­part­ment

2024 Klei­ner M, Po­le­recky L. Lott C, Ber­gin C., Häus­ler S, Liebeke M,Wen­trup C, Musat N, Kuy­pers MMM, Dubilier N. 2024. Me­cha­nism of high en­er­gy ef­fi­ci­en­cy of car­bon fixa­ti­on by sul­fur-oxi­di­zing sym­bi­onts re­vea­led by sin­gle-cell ana­ly­ses and me­ta­bo­lic mo­de­ling. bioRxiv. DOI: https://doi.org/10.1101/2023.11.25.568684
  Michellod DLiebeke M. 2024. Me­ta­bo­lic dia­lo­gue: host-com­pound shapes gut mi­cro­bio­ta. Nature Microbiologydoi: 10.1038/s41564-023-01592-8
  Sa­ha­ru­ka V, Viei­ra LM, Stuart L, Ekelöf M, Mo­lenaar MR, Bailo­ni A, Ovchin­ni­ko­va K, Solt­wisch J, Baus­ba­cher, T, Jakob, D., King, M, Mül­ler MA., Oe­t­jen J, Pace C, Pin­to FE, Stritt­mat­ter,N. Veli­ckovic D, Speng­ler B, Mud­di­man DC, Liebeke M, Jan­felt C, Good­win R, Eber­lin LS, An­der­ton CR, Hopf C, Drei­se­werd K, Alex­and­rov T. 2024. Lar­ge-sca­lee­va­lua­ti­on of­s­pa­ti­al me­ta­bo­lo­mics pro­to­cols and tech­no­lo­gies. bioRxivhttps://doi.org/10.1101/2024.01.29.577354
 

Schar­hau­ser F, Saa­ve­dra DEM, Pröts P, Ott JA, Geier BGruber-Vodicka HR, Po­li­kar­p­ov M, Bou­ren­kov G, Leisch N. 2024. Re­vi­si­on of the ge­nus Robbea (Stil­bone­ma­ti­nae: Des­mo­do­ri­dae), world­wi­de ab­un­dant ma­ri­ne ne­ma­to­des with chro­mo­pho­ric Fe–Br in­clu­si­ons and the de­scrip­ti­on of a new stil­bone­ma­ti­ne ge­nus. Zoological Journal of the Linnean Society, zla­e005, https://doi.org/10.1093/zoolinnean/zlae005

  Zu­ffa S, Schmid R, Bau­er­meis­ter A, Go­mes P, Wen­der P, Ca­ra­bal­lo-Ro­d­ri­guez AM; El Abie­ad Y, Aron, Al­le­gra T, Liebeke M, Bourceau P, Gen­try EC, Zem­lin J, Mee­han MJ. 2024. A ta­xo­no­mi­cal­ly-in­for­med mass spec­tro­me­try se­arch tool for mi­cro­bi­al me­ta­bo­lo­mics data. Nature Microbiologyhttps://www.nature.com/articles/s41564-023-01575-9

 

 

 

2023 Bour­ceau P, Vul­tu­re B, Su­er­dieck,V, Bien T, Solt­wisch J, Drei­se­werd K, Lie­be­ke M. 2023. Vi­sua­liza­t­i­on of me­ta­bo­li­tes and mi­cro­bes at high spa­ti­al re­so­lu­ti­on using MAL­DI mass spec­tro­me­try ima­ging and in situ fluo­re­scence la­be­ling. Nature Protocols. DOI: https://​doi.org/​10.1038/​s41596-023-00864-1
  Es­pa­da-Hi­no­jo­sa S, Kar­t­häu­ser C, Sri­va­s­ta­va A, Schus­ter L, Win­ter T,de Oliveira AL, Schulz F, Horn M, Sie­vert S, Bright M. 2023 Com­pa­ra­ti­ve ge­no­mics of a ver­ti­cal­ly trans­mit­ted thio­tro­phic bac­te­ri­al ec­to­sym­bi­ont and its clo­se free-li­ving re­la­ti­ve.Molecular ecology resources.DOI: 10.1111/1755-0998.13889
  Gei­er B, Gil-Man­sil­la E, Li­ut­ke­vici­u­te Z, Hel­lin­ger R, Van­den Bro­eck J, Oe­t­jen J, Liebeke M, Gru­be CW. 2023. Mul­ti­ple­xed neu­ro­pep­ti­de map­ped in ant brains in­te­gra­ting mi­cro­to­mo­gra­phy and 3D mass spec­tro­me­try ima­ging. PNAS Nexus. DOI:10.1093/pnasnexus/pgad144
  Klei­ner M, Kou­ris A. Vio­let­te M,D'Angelo G, Liu Y, Ko­re­nek A, To­lić N, Sach­sen­berg T, Mc­Cal­der J, Lip­ton MS, Strous M. 2023. Ul­tra-sen­si­ti­ve Iso­to­pe pro­bing to quan­ti­fy ac­tivi­ty and sub­stra­te as­si­mi­la­ti­on in mi­cro­bio­mes.Microbiome11, 24. DOI: https://doi.org/10.1186/s40168-022-01454-1
  Krö­ber, E. 2023. Ver­steck­te Mit­es­ser: che­mo­syn­the­ti­sche Sym­bi­on­ten in schwe­fe­li­ger Um­ge­bung. BIO­S­pec­trum 05.23. DOI: 10.1007/s12268-023-1976-x
  Michellod D, Bien T, Bir­gel D, Vio­let­te M, Klei­ner M, Fe­arn S, Zeidler C, Gruber-Vodicka HR, Dubilier N, Liebeke M. 2023. De novo phy­tos­te­rol syn­the­sis in ani­mals. Science 380 (6644) 455-456. DOI: 10.1126/science.add7830
  Na­j­le, SR, Grau-Bové X, Elek A, Na­var­re­te C, Ci­an­fe­ro­ni D, Chi­va C, Cañas-Ar­men­te­ros D, Malla­bia­bar­rena A, Kamm K, Sa­bi­dó E, Gruber-Vodicka H, Schier­wa­ter B, Ser­ra­no L, Sebé-Pe­drós A. 2023. Step­wi­se emer­gence of the neu­ro­nal gene ex­pres­si­on pro­gram in ear­ly ani­mal evo­lu­ti­on. Cell. 186(21) 4676-4693. https://doi.org/10.1016/j.cell.2023.08.027
  Saa­di AJ, de Oliveira AL, Ko­cot KM, Schwa­ha T. 2023. Ge­no­mic and tran­scrip­to­mic sur­vey of bryo­zo­an Hox and Pa­raH­ox ge­nes with em­pha­sis on phy­lac­to­lae­ma­te bryo­zo­ans. BMC genomicshttps://doi.org/10.1186/s12864-023-09826-z

 

 

2022 Bour­ceau PMi­chel­lod DGei­er BLiebeke M. 2022. Spa­ti­al me­ta­bo­lo­mics shows con­tras­ting pho­pho­no­li­pid dis­tri­bu­ti­on in tis­su­es of ma­ri­ne bi­val­ves. PeerJ Analytical Chemistry. DOI:https://doi.org/10.7717/peerj-achem.21
  Buck-Wie­se H, An­ds­kog MA, Nguy­en NP, Bligh M, As­ma­la E, Vi­dal-Mel­go­sa S, Liebeke M, Gustafs­son C, Hehe­mann J-H. 2022. Fu­co­id brown al­gae in­ject fu­co­idan car­bon into the oce­an. PNAS. DOI:https://doi.org/10.1073/pnas.2210561119
  Kröber E, Mankowski A, Schä­fer H. 2022. Mi­cro­or­ga­nisms as­so­cia­ted with Sporobolus anglicus, an in­va­si­ve di­me­thyl­sul­fo­nio­pro­pio­na­te pro­du­cing salt mar­sh plant, are an un­re­co­gni­zed sink for di­me­thyl­sul­fi­de. Rising Stars in Terrestrial Microbiology 2022 in Frontiers in Microbiology. DOI: 10.3389/fmicb.2022.950460
  Kröber E, Ka­nu­kol­lu S, Wen­de S, Brin­gel F, Kolb S. 2022. A pu­ta­tive­ly new fa­mi­ly of al­pha­pro­te­ob­ac­te­ri­al chlo­ro­me­tha­ne de­gra­ders from a de­ci­du­ous fo­rest soil re­vea­led by sta­ble iso­to­pe pro­bing and me­ta­ge­no­mics. Environmental Microbiome. DOI: https://doi.org/10.1186/s40793-022-00416-2
  Mi­chel­lod D, Bien T, Bir­gel D, Jen­sen M, Klei­ner M, Fe­arn S, Zeid­ler C, Gru­ber-Vo­di­cka HR, Dubilier N, Liebeke M. 2022. De novo phy­tos­te­rol syn­the­sis in ani­mals. bioRxiv. DOI: 10.1101/2022.04.22.489198
  Par­e­des GF, Vieh­boeck T, Mar­kert S, Mausz MA, Sato Y, Lie­be­ke MKö­nig L, Bulghe­re­si S. 2022. Dif­fe­ren­ti­al re­gu­la­ti­o­nof­de­gra­da­ti­on an­dim­mu­ne pa­thways un­der­lies ad­ap­ta­ti­on of the ec­to­sym­bio­tic ne­ma­to­de Laxus oneistus too­xic‑an­oxic in­ter­faces. Scientific Reports. DOI: https://doi.org/10.1038/s41598-022-13235-9 
  Sato YWipp­ler JWen­trup CAn­sor­ge RSa­dow­ski MGru­ber‑Vo­di­cka H, Dubilier N, Klei­ner M. 2022. Fi­de­li­ty va­ries in the sym­bio­sis­bet­ween a gut­less ma­ri­ne worm and its­mi­cro­bi­al con­sor­ti­um. Microbiome. DOI: 10.1186/s40168-022-01372-2
  Schorn S, Ah­mer­kamp S, Bul­lock E, We­ber M, Lott C, Liebeke M, La­vik G, Kuy­pers M, Graf JS, Mi­lucka J. 2022. Di­ver­se me­thy­lo­tro­phic me­tha­no­ge­nic ar­chaea cau­se high me­tha­ne emis­si­ons from se­agrass mea­dows. PNAShttps://doi.org/10.1073/pnas.2106628119
  Sogin EM, Michellod D, Gruber-Vodicka HR, Bourceau P, Geier B, Mei­er DV, Sei­del M, Ah­mer­kamp S, Schorn S, D’Angelo G, Pro­cac­ci­ni G, Dubilier N, Liebeke M. 2022. Su­gars do­mi­na­te the se­agrass rhi­zo­s­phe­re. Nature Ecology & Evolutionhttps://doi.org/10.1038/s41559-022-01740-z
  Voh­sen SA,Gruber-Vodicka HR, Meyer M, Sadowski M, Dubilier N, Fis­her CR, Baums IB. 2022. The deep-sea co­ral,Callogorgia delta, as­so­cia­ted with bac­te­ria be­longing to a no­vel ma­ri­ne branch of the Mol­li­cu­tes.bioRxiv.. DOI: 10.1101/2022.10.07.511369
  Von­nah­me TR, Klau­sen L, Bank RM, Michellod D, La­vik G, Diet­rich U, Gra­din­ger R. 2022. Light and freshwa­ter di­sch­ar­ge dri­ve the bio­geo­che­mis­try and mi­cro­bi­al eco­lo­gy in a sub-Arc­tic fjord over the Po­lar night. Frontiers Mar. Sci. 9:915192. doi.org/10.3389/fmars.2022.915192

 

 2021

Al­be­cker MA, Wilkins LGE, Krue­ger-Had­field SA, Bas­hev­kin SM, Hahn MW, Hare MP, Kinds­va­ter HK, Se­well MA, Lot­ter­hos KE, Reit­zel AM, 2021. Does a com­plex life cy­cle af­fect ad­ap­ta­ti­on to en­vi­ron­men­tal chan­ge? Ge­no­me-in­for­med in­sights for cha­rac­te­ri­zing selec­tion across com­plex life cy­cle. Proceedings of the Royal Society B: Biological Sciences 288 (1964), 20212122. https://doi.org/10.1098/rspb.2021.2122

 
 

Brein­lin­ger S, Phil­lips TJ, Ha­ram BN, Ma­res J, Ye­re­na JAM, Hrou­zek P, So­bot­ka R, Hen­der­son WM, Schmie­der P, Wil­li­ams SM, Lau­der­da­le JD, Wil­de HD, Ger­rin W, Kust A, Wa­shing­ton JW, Wag­ner C, Geier B, Liebeke M, Enke H, Nie­der­mey­er THJ, Wil­de S B. Hun­ting the ea­gle kil­ler: A cya­no­bac­te­ri­al neu­ro­to­xin cau­ses va­cuo­lar mye­li­no­pa­thy. Science,371(6536), 1335. doi:10.1126/science.aax9050

 
 

Franke M, Geier B, Ham­mel JU, Dubilier N, Leisch N. 2021. Co­m­ing to­ge­ther—sym­bi­ont ac­qui­si­ti­on and ear­ly de­ve­lop­ment in deep-sea ba­thy­mo­dio­li­ne mus­sels. Proceedings of the Royal Society B, 288(1957), 20211044. https://doi.org/10.1098/rspb.2021.1044

 
 

Gei­er B, Oe­t­jen J, Ru­t­hen­stei­ner BPo­li­kar­p­ov M, Gru­ber-Vo­di­cka HR, Liebeke M. 2021. Con­nec­ting struc­tu­re and func­tion from or­ga­nisms to mole­cu­les in small-ani­mal sym­bio­ses through che­mo-his­to-to­mo­gra­phy. PNAS. 118(27)e2023773118; doi:10.1073/pnas.2023773118

 
 

Krö­ber E, Wen­de S, Ka­nu­kol­lu S, Bu­chen-Tschis­ka­le C, Be­sau­ry L, Kepp­ler F, Vuil­leu­mier S, Kolb S, Brin­gel F. 2021.13C-chlo­ro­me­tha­ne in­cu­ba­ti­ons pro­vi­de evi­dence for no­vel bac­te­ri­al chlo­ro­me­tha­ne de­gra­ders in a li­ving tree fern. Environmental Microbiology. doi:10.1111/1462-2920.15638

 
 

Janda M, Seah BKB, Ja­cob D, Beck­mann J, Gei­er B, Lie­be­ke M. 2021. De­ter­mi­na­ti­on of Ab­un­dant Me­ta­bo­li­te Ma­trix Ad­ducts Il­lu­mi­na­tes the Dark Me­ta­bo­lo­me of MAL­DI-Mass Spec­tro­me­try Ima­ging Da­ta­sets. Ana­ly­ti­cal Che­mis­try.  93 (24), 8399-8407  doi:10.1021/acs.analchem.0c04720

 
 

Krö­ber E, Cun­ningham MR, Pei­xo­to J, Spur­gin L, Wi­scher D, Kru­ger R, Ku­maresan D. 2021. Com­pa­ra­ti­ve ge­no­mics ana­ly­zes in­di­ca­te dif­fe­ren­ti­al me­thy­la­ted ami­ne uti­liza­t­i­on trait wi­t­hin mem­bers of the ge­nus Gem­mo­bac­ter. En­vi­ron­men­tal Mi­cro­bio­lo­gy Re­ports. doi:10.1111/1758-2229.12927

 
 

Mankowski A, Klei­ner M, Er­séus C, Leisch N, Sato Y, Vol­land J-M, Hüt­tel B, Wen­trup C,Woy­ke T, Wippler J, Dubilier N, Gruber-Vodicka H. 2021. High­ly va­ria­ble fi­de­li­ty dri­ves sym­bi­ont com­mu­ni­ty com­po­si­ti­on in an ob­li­ga­te sym­bio­sis. bioRxiv. doi:10.1101/2021.04.28.441735

 
 

Mohr W, Leh­nen N, Ah­mer­kamp S, Mar­chant HK, Graf JS, Tschitsch­ko B, Yil­maz P, Litt­mann S, Gruber-Vodicka H, Leisch N, We­ber M, Lott C, Schu­bert CJ, Mi­lucka J, Kuy­pers MMM. 2021. Ter­restri­al-type ni­tro­gen-fi­xing sym­bio­sis bet­ween se­agrass and a ma­ri­ne bac­te­ri­um. Nature 600, 105–109. https://doi.org/10.1038/s41586-021-04063-4.

 
 

Sato Y, Wippler J, Wen­trup C, An­sor­ge R, Sa­dow­ski M, Gru­ber-Vo­di­cka H, Du­bi­lier N, Klei­ner M. 2021. Fi­de­li­ty va­ries in the sym­bio­sis bet­ween a gut­less ma­ri­ne worm and its mi­cro­bi­al con­sor­ti­um. bioR­xiv. doi: https://doi.org/10.1101/2021.01.30.428904

 
 

So­gin E, Mi­chel­lod D, Gru­ber-Vo­di­cka H, Bour­ceau P, Gei­er B, D Mei­er, Sei­del M, Hach PF, Pro­cac­ci­ni G, Du­bi­lier N, Lie­be­ke M. 2021. Su­gars do­mi­na­te the se­agrass rhi­zo­s­phe­re. bioR­xiv, 797522. doi:10.1101/797522

 
 

So­gin E, Klei­ner M, Bo­row­ski C, Gru­ber-Vo­di­cka HR, Du­bi­lier N. 2021. Life in the dark: Phy­lo­ge­ne­tic and phy­sio­lo­gi­cal di­ver­si­ty of che­mo­syn­the­tic sym­bio­ses. An­nu­al Re­view of Mi­cro­bio­lo­gy75 (1), 695-718. doi:10.1146/annurev-micro-051021-123130

 
 

Ücker M, An­sor­ge R, Sato Y, Sa­ya­ve­dra L, Breu­sing C, Du­bi­lier N. 2021. Deep-sea mus­sels from a hy­brid zone on the Mid-At­lan­tic Ridge host ge­ne­ti­cal­ly in­dis­tin­gu­is­ha­ble sym­bi­onts. ISME J. doi:10.1038/​s41396-021-00927-9

 

 

2020

Ansorge R, Ro­ma­no S, Sayavedra L, Rubin-Blum M, Gruber-Vodicka H, Scil­i­po­ti S, Mo­la­ri M, Dubilier N, Pe­ter­sen J. 2020. The hi­d­den pan­ge­no­me: com­pa­ra­ti­ve ge­no­mics re­veals per­va­si­ve di­ver­si­ty in sym­bio­tic and free-li­ving sul­fur-oxi­di­zing bac­te­ria. bioRxiv, 2020.2012.2011.421487. https://doi.org/10.1101/2020.12.11.421487

 
 

Assié A, Leisch N, Mei­er DV, Gruber-Vodicka H, Te­get­mey­er HE, Mey­er­dier­ks A, Klei­ner M, Hinz­ke T, Joye S, Sax­ton M, Dubilier N, Pe­ter­sen JM. 2020. Ho­ri­zon­tal ac­qui­si­ti­on of a patch­work Cal­vin cy­cle by sym­bio­tic and free-li­ving Cam­py­lo­bac­te­ro­ta (for­mer­ly Ep­si­lon­pro­te­ob­ac­te­ria). ISME J 14: 104–122. doi:10.1038/s41396-019-0508-7

 
 

Breu­sing C, Franke M, Young CR. 2020. In­tra-host sym­bi­ont di­ver­si­ty in eas­tern Pa­ci­fic cold seep tu­be­worms iden­ti­fied by the 16S-V6 re­gi­on, but un­de­tec­ted by the 16S-V4 re­gi­on. PLOS ONE 15(1):e0227053. https://doi.org/10.1371/journal.pone.0227053

 
 

Buck-Wie­se H, Fa­nu­el M, Liebeke M, Le Mai Hoang K, Par­do-Var­gas A, See­ber­ger PH, Hehe­mann J-H, Ro­gni­aux H, Jack­son GP, Ro­partz D. 2020.  Dis­cri­mi­na­ti­on of β-1,4- and β-1,3-linka­ges in na­ti­ve oli­go­sac­cha­ri­des via char­ge trans­fer dis­so­cia­ti­on mass spec­tro­me­try. J Am Soc Mass Spectrom 31(6):1249–59. https://dx.doi.org/10.1021/jasms.0c00087

 
 

Franke M, Geier B, Ham­mel JU, Dubilier N, Leisch N. 2020. Be­co­m­ing sym­bio­tic – the sym­bi­ont ac­qui­si­ti­on and the ear­ly de­ve­lop­ment of ba­thy­mo­dio­lin mus­sels. bioRxiv 2020.10.09.333211. doi:10.1101/2020.10.09.333211

 
 

Geier B, Liebeke M. 2020. Die che­mi­sche Spra­che von Sym­bio­sen sicht­bar ma­chen. Biospektrum 26:493–495. doi:10.1007/s12268-020-1435-x

 
 

Geier B, Oe­t­jen J, Ru­t­hen­stei­ner B, Po­li­kar­p­ov M, Gruber-Vodicka HR, Liebeke M. 2020. CHEM­HIST, con­nec­ting struc­tu­re and func­tion from or­ga­nisms to mole­cu­les in small ani­mal sym­bio­ses through che­mo-his­to-to­mo­gra­phy. bioRxiv 2020.09.28.316802. doi:10.1101/2020.09.28.316802

 
 

Geier B, Sogin EM, Michellod D, Janda M, Kom­pau­er M, Speng­ler B, Dubilier N, Liebeke M. 2020. Spa­ti­al me­ta­bo­lo­mics of in situ host–mi­cro­be in­ter­ac­tions at the mi­cro­met­re sca­le. Nature Microbiology. 5(3):498–510. https://doi.org/10.1038/s41564-019-0664-6

 
 

Gruber-Vodicka HR, Seah BKB, Pru­es­se E. 2020. phy­lo­F­lash: Ra­pid Small-Sub­u­nit rRNA Pro­filing and Tar­ge­ted As­sem­bly from Me­ta­ge­no­mes. mSystems 5. doi:10.1128/mSystems.00920-20

 
 

Hahn CJ, Laso-Pé­rez R, Vul­ca­no F, Va­zio­u­ra­kis K-M, Stok­ke R, Steen IH, Tes­ke A, Boe­ti­us A, Liebeke M, Amann R, Knit­tel K, We­ge­ner G. 2020. “Can­di­da­tus Etha­nope­redens,” a Ther­mo­phi­lic Ge­nus of Ar­chaea Me­dia­ting the An­ae­ro­bic Oxi­da­ti­on of Etha­ne. mBio 11:e00600-20. doi: 10.1128/mBio.00600-20

 
  Hin­ger I ,Ansorge R , Muss­mann M , Ro­ma­no S. 2020. Phy­lo­ge­no­mic Ana­ly­ses of Mem­bers of the Wi­de­s­pre­ad Ma­ri­ne He­te­ro­tro­phic Ge­nusPseudovibrioSug­gest Dis­tinct Evo­lu­tio­na­ry Tra­jec­to­ries and a No­vel Ge­nus,Polycladidibactergen. nov. Appl Environ Microbiol 86(4). https://doi.org/10.1128/AEM.02395-19  
  Koch EJ, Mo­ria­no-Gu­tier­rez S, Ruby EG, Mc­Fall-Ngai M, Liebeke M. 2020. The im­pact of per­sis­tent co­lo­niza­t­i­on by Vibrio fischeri on the me­ta­bo­lo­me of the host squid Euprymna scolopes. Journal of Experimental Biology 223(16): je­b212860. doi:10.1242/jeb.212860  
 

Pon­nu­du­rai R, Hei­den SE, Sayavedra L, Hinz­ke T, Klei­ner M, Hentsch­ker C, Fel­beck H, Sie­vert SM, Schlü­ter R, Be­cher D, Schwe­der T, Mar­kert S. 2020. Com­pa­ra­ti­ve pro­teo­mics of re­la­ted sym­bio­tic mus­sel spe­cies re­veals high va­ria­bi­li­ty of host–sym­bi­ont in­ter­ac­tions. ISME J 14: 649–656. doi:10.1038/s41396-019-0517-6

 
  Ro­ma­no C, Nu­nes-Jor­ge A, Le Bris N, Rou­se GW, Mar­tin D, Borowski C. 2020. Woo­den Step­ping Sto­nes: Di­ver­si­ty and Bio­geo­gra­phy of Deep-Sea Wood Bo­ring Xy­lo­pha­gai­dae (Mol­lu­s­ca: Bi­val­via) in the North-East At­lan­tic Oce­an, With the De­scrip­ti­on of a New Ge­nus. Front Mar Sci 7. doi:10.3389/fmars.2020.579959  
  Sato Y, Wippler J, Wen­trup C, Woy­ke T, Dubilier N, Klei­ner M. 2020. High-Qua­li­ty Draft Ge­no­me Se­quen­ces of the Un­cul­tu­red Del­ta3 En­do­sym­bi­ont (Del­ta­pro­te­ob­ac­te­ria) As­sem­bled from Me­ta­ge­no­mes of the Gut­less Ma­ri­ne Worm Ola­vi­us al­gar­ven­sis. Microbiol Resour Announc 9. doi:10.1128/MRA.00704-20  
  Sato Y, Wippler J, Wen­trup C, Dubilier N, Klei­ner M. 2020. High-Qua­li­ty Draft Ge­no­me Se­quen­ces of Two Del­ta­pro­te­ob­ac­te­ri­al En­do­sym­bi­onts, Del­ta1a and Del­ta1b, from the Un­cul­tu­red Sva0081 Cla­de, As­sem­bled from Me­ta­ge­no­mes of the Gut­less Ma­ri­ne Worm Ola­vi­us al­gar­ven­sis. Microbiol Resour Announc 9. doi:10.1128/MRA.00276-20  
  Schar­hau­ser F, Zimmermann J, Ott JA, Leisch N, Gruber‐Vodicka HR. 2020. Mor­pho­lo­gy of ob­li­ga­te ec­to­sym­bi­onts re­veals Par­alaxus gen. nov.: A new cir­cum­tro­pi­cal ge­nus of ma­ri­ne stil­bone­ma­ti­ne ne­ma­to­des. Zoologica Scripta 49:379–394. doi:10.1111/zsc.12399  
 

Schucht PJ, Ru­ehr PT, Geier B, Glaw F, Lam­bertz M. 2020. Ar­mo­red with skin and bone: A com­bi­ned his­to­lo­gi­cal and mu CT-stu­dy of the ex­cep­tio­nal in­te­gu­ment of the Ant­sin­gy leaf cha­me­le­on Brookesia perarmata (An­gel, 1933). Journal of Morphology 281(7):754–64. https://publons.com/publon/10.1002/jmor.21135

 
 

Seah BKB, Vol­land J-M, Leisch N, Schwa­ha T, Dubilier N, Gruber-Vodicka HR. 2020. Ken­tro­pho­ros ma­gnus sp. nov. (Ci­lio­pho­ra, Ka­ryo­re­lic­tea), a new flagship spe­cies of ma­ri­ne in­ter­sti­ti­al ci­lia­tes. bioRxiv 2020.03.19.998534. doi:10.1101/2020.03.19.998534

 
 

Si­chert A, Cor­zett CH, Schech­ter MS, Un­fried F, Mar­kert S, Be­cher D, Fer­nan­dez-Gu­er­ra A, Liebeke M, Schwe­der T, Polz MF, Hehe­mann J-H. Ver­ru­co­mi­cro­bia use hund­reds of en­zy­mes to di­gest the al­gal po­ly­sac­cha­ri­de fu­co­idan. Nature Microbiology 5(8):1026–39. https://doi.org/10.1038/s41564-020-0720-2

 
 

Sogin EM, Leisch N, Dubilier N. 2020. Che­mo­syn­the­tic sym­bio­ses. Current Biology 30:R1137–R1142. doi:10.1016/j.cub.2020.07.050

 
 

Voh­sen SA, An­der­son KE, Gade AM, Gruber-Vodicka HR, Dan­nen­berg RP, Os­man EO, Dubilier N, Fis­her CR, Baums IB. 2020.  Deep-sea co­rals pro­vi­de new in­sight into the eco­lo­gy, evo­lu­ti­on, and the role of plas­tids in wi­de­s­pre­ad api­com­plex­an sym­bi­onts of an­t­ho­zo­ans. Microbiome 8(1):34. https://doi.org/10.1186/s40168-020-00798-w

 
2019

Ansorge R, Ro­ma­no S, Sa­ya­ve­dra L, Porras MÁG, Kup­c­zok A, Te­get­mey­er HE, Dubilier N, Pe­ter­sen J. 2019. Func­tio­nal di­ver­si­ty enables mul­ti­ple sym­bi­ont strains to co­exist in deep-sea mus­sels. Nature Microbiology 4: 2487–2497. doi:10.1038/s41564-019-0572-9

 
 

Alex­and­rov T, Ovchin­ni­ko­va K, Pal­mer A, Ko­va­lev V, Ta­ra­sov A, Stuart L, Nig­met­zia­nov R, Fay D, Key METASPACE Contributors. 2019. METAS­PACE: A com­mu­ni­ty-po­pu­la­ted know­ledge base of spa­ti­al me­ta­bo­lo­mes in health and di­sea­se. bioRxiv 539478. doi:10.1101/539478

 
 

Berg JS, Pje­vac P, Som­mer T, Buck­ner CRT, Phil­ip­pi M, Hach PF, Liebeke M, Hol­tap­pels M, Dan­za F, To­nol­la M, Sen­gupta A, Schu­bert CJ, Mi­lucka J, Kuy­pers MMM. n.d. Dark ae­ro­bic sul­fi­de oxi­da­ti­on by an­oxy­ge­nic pho­to­tro­phs in an­oxic wa­ters. Environmental Microbiology 21: 1611-1626. doi:10.1111/1462-2920.14543

 
 

Geier B, Franke M, Ru­t­hen­stei­ner B, González Porras MÁ, Gruhl A, Wör­mer L, Moos­mann J, Ham­mel JU, Dubilier N, Leisch N, Liebeke M. 2019.  Cor­re­la­ti­ve 3D ana­to­my and spa­ti­al che­mis­try in ani­mal-mi­cro­be sym­bio­ses: de­ve­lo­ping samp­le pre­pa­ra­ti­on for pha­se-con­trast syn­chro­tron ra­dia­ti­on ba­sed mi­cro-com­pu­ted to­mo­gra­phy and mass spec­tro­me­try ima­ging. In: De­ve­lop­ments in X-Ray To­mo­gra­phy XII. In­ter­na­tio­nal So­cie­ty for Op­tics and Pho­to­nics. 1111306. https://doi.org/10.1117/12.2530652

 
 

Gruber-Vodicka HR, Leisch N, Klei­ner M, Hinz­ke T, Liebeke M, Mc­Fall-Ngai M, Had­field MG, Dubilier N. 2019. Two in­tra­cel­lu­lar and cell type-spe­ci­fic bac­te­ri­al sym­bi­onts in the pla­co­zo­an Trichoplax H2. Nature Microbiology 4: 1465–1474. doi:10.1038/s41564-019-0475-9

 
  Jäckle O, Seah BKB, Tietjen M, Leisch N, Liebeke M, Klei­ner M, Berg JS, Gruber-Vodicka HR. 2019. Che­mo­syn­the­tic sym­bi­ont with a dras­ti­cal­ly re­du­ced ge­no­me ser­ves as pri­ma­ry en­er­gy sto­r­a­ge in the ma­ri­ne flat­worm Pa­ra­ca­ten­u­la. PNAS 116(17): 8505-8514. 201818995. doi:10.1073/pnas.1818995116  
 

Liebeke M, Puskás E. 2019. Dry­ing En­han­ces Si­gnal In­ten­si­ties for Glo­bal GC–MS Me­ta­bo­lo­mics. Metabolites 9(4), 68. doi:10.3390/metabo9040068

 
 

Ro­me­ro Pi­ca­zo D, Da­gan T, Ansorge R, Pe­ter­sen JM, Dubilier N, Kup­c­zok A. 2019. Ho­ri­zon­tal­ly trans­mit­ted sym­bi­ont po­pu­la­ti­ons in deep-sea mus­sels are ge­ne­ti­cal­ly iso­la­ted. ISME J 13: 2954–2968. doi:10.1038/s41396-019-0475-z

 
  Rubin-Blum M, Dubilier N, Klei­ner M. 2019. Ge­ne­tic evi­dence for two car­bon fixa­ti­on pa­thways (the Cal­vin-Ben­son-Bass­ham cy­cle and the Re­ver­se Tri­c­ar­boxy­lic Acid Cy­cle) in sym­bio­tic and free-li­ving bac­te­ria. mSphere 4(1): e00394-18. doi:10.1128/mSphere.00394-18  
  Rubin-Blum M, Antony CP, Sayavedra L, Mar­tí­nez-Pé­rez C, Bir­gel D, Peck­mann J, Wu Y-C, Car­de­nas P, Mac­Do­nald I, Mar­con Y, Sah­ling H, Hent­schel U, Dubilier N. 2019. Fu­e­led by me­tha­ne: deep-sea spon­ges from asphalt seeps gain their nut­ri­ti­on from me­tha­ne-oxi­di­zing sym­bi­onts. The ISME Journal 13: 1209–1225. doi:10.1038/s41396-019-0346-7  
  Sayavedra L, Ansorge R, Rubin-Blum M, Leisch N, Dubilier N, Pe­ter­sen JM. 2019. Ho­ri­zon­tal ac­qui­si­ti­on fol­lo­wed by ex­pan­si­on and di­ver­si­fi­ca­ti­on of to­xin-re­la­ted ge­nes in deep-sea bi­val­ve sym­bi­onts. bioRxiv 605386. doi:10.1101/605386  
  Schnier J, Ahl­richs WH,Gruhl A, Schul­bert C, Tei­chert S, Kie­ne­ke A. 2019.  Ul­tra­struc­tu­re of the epi­der­mal gland sys­tem of Tetranchyroderma suecicum Boa­den, 1960 (Gastrotri­cha: Ma­cro­da­sy­ida) in­di­ca­tes a de­fen­si­ve func­tion of its exu­da­te. Zoomorphology 138(4):443–62. https://doi.org/10.1007/s00435-019-00462-4  
  Seah BKB, Antony CP, Hu­et­tel B, Zar­zy­cki J, Scha­da von Bor­zys­kow­ski L, Erb TJ, Kou­ris A, Klei­ner M, Liebeke M, Dubilier N, Gruber-Vodicka HR. 2019. Sul­fur-oxi­di­zing sym­bi­onts wi­thout ca­no­ni­cal ge­nes for au­to­tro­phic CO2 fixa­ti­on. mBio 10: e01112-19. doi:10.1128/mBio.01112-19  
 

Sogin EM, Puskás E, Dubilier N, Liebeke M. 2019. Ma­ri­ne Me­ta­bo­lo­mics: a me­thod for non­tar­ge­ted mea­su­re­ment of me­ta­bo­li­tes in sea­wa­ter by gas chro­ma­to­gra­phy–mass spec­tro­me­try. mSystems 4(6): e00638-19. doi:10.1128/mSystems.00638-19

 
 

Wil­kins LGE, Le­r­ay M, O’­Dea A, Yuen B, Pei­xo­to RS, Pe­rei­ra TJ, Bik HM, Coil DA, Duf­fy JE, Her­re EA, Les­si­os HA, Lu­cey NM, Me­jia LC, Ras­her DB, Sharp KH, Sogin EM, Tha­cker RW, Thur­ber RV, Wcis­lo WT, Wil­banks EG, et al. 2019. Host-as­so­cia­ted mi­cro­bio­mes dri­ve struc­tu­re and func­tion of ma­ri­ne eco­sys­tems. PLOS Biology 17(11):e3000533. https://doi.org/10.1371/journal.pbio.3000533

 
2018

Bang C, Da­gan T, Dei­nes P, Dubilier N, Duschl WJ, Frau­ne S, Hent­schel U, Hirt H, Hül­ter N, Lach­nit T, Pi­ca­zo D, Pita L, Po­go­reutz C, Rä­de­cker N, Saad MM, Schmitz RA, Schu­len­burg H, Vools­tra CR, Wei­land-Bräu­er N, Zieg­ler M, Bosch TCG. 2018. Me­ta­or­ga­nisms in ex­tre­me en­vi­ron­ments: Do mi­cro­bes play a role in or­ga­nis­mal ad­ap­ta­ti­on? Zoology 127: 1–19. doi:10.1016/j.zool.2018.02.004

 
  Bergin C, Wentrup C, Brewig N, Blazejak A, Er­séus C, Gie­re O, Schmid M, De Wit P, Dubilier N. 2018. Ac­qui­si­ti­on of a no­vel sul­fur-oxi­di­zing sym­bi­ont in the gut­less ma­ri­ne worm Inanidrilus exumae. Applied and Environmental Microbiology 84(7): e02267-17. doi:10.1128/AEM.02267-17
 

Call­beck CM, La­vik G, Fer­de­l­man TG, Fuchs B, Gruber-Vodicka HR, Hach PF, Litt­mann S, Schof­fe­len NJ, Kal­ve­la­ge T, Thom­sen S, Schunck H, Lö­scher CR, Schmitz RA, Kuy­pers MMM. 2018. Oxy­gen mi­ni­mum zone cryp­tic sul­fur cy­cling sustai­ned by off­shore trans­port of key sul­fur oxi­di­zing bac­te­ria. Nature Communications 9: 1729. doi:10.1038/s41467-018-04041-x

  Jäckle O. 2018. Mouth­less in ma­ri­ne se­di­ments - sym­bio­sis ma­kes it pos­si­ble In: Hem­pel G, Hem­pel I, Hor­n­idge A-K, edi­tors. Sci­en­ti­fic Part­nership for a Bet­ter Fu­ture. Bre­men, Ger­ma­ny: Edi­ti­on Fal­ken­berg. pp. 25–28.
 

Kit­zin­ger K, Koch H, Lü­cker S, Sed­lacek C J, Her­bold C, Schwarz J, Dae­be­ler A, Mu­el­ler A J, Lu­kum­bu­zya M, Ro­ma­no S, Leisch N, Karst S M, Kir­ke­gaard R, Al­bert­sen M, Niel­sen P H, Wag­ner M, Daims H. 2018. Cha­rac­te­riza­t­i­on of the first “Candidatus Ni­tro­to­ga” iso­la­te re­veals me­ta­bo­lic ver­sa­ti­li­ty and se­pa­ra­te evo­lu­ti­on of wi­de­s­pre­ad ni­tri­te-oxi­di­zing bac­te­ria. mBio 9: e01186-18. https://doi.org/10.1128/mBio.01186-18

 

Kru­ken­berg V, Rie­del D, Gruber‐Vodicka HR, But­ti­gieg PL, Te­get­mey­er HE, Boe­ti­us A, We­ge­ner G. 2018. Gene ex­pres­si­on and ul­tra­struc­tu­re of meso- and ther­mo­phi­lic me­tha­notro­phic con­sor­tia. Environmental Microbiology 20:1651–1666. doi:10.1111/1462-2920.14077

 

Kryl­o­va EM, Sah­ling H, Borowski C 2018. Re­sol­ving the sta­tus of the fa­mi­lies Ve­si­co­my­idae and Kel­li­el­li­dae (Bi­val­via: Ve­ne­ri­da), with no­tes on their eco­lo­gy. Journal of Molluscan Studies 84(1): 69-91. https://doi.org/:10.1093/mollus/eyx050

 

Lau­mer CE, Gruber-Vodicka HR, Had­field MG, Pear­se VB, Ries­go A, Ma­rio­ni JC, Gi­ri­bet G. 2018. Sup­port for a cla­de of Pla­co­zoa and Cn­i­da­ria in ge­nes with mi­ni­mal com­po­si­tio­nal bias. eLife 7: e36278. doi:10.7554/eLife.36278

 

Pen­de N, Wang J, We­ber PM, Ver­heul J, Kuru E, Ritt­mann SK-MR, Leisch N, Van­Nieu­wen­hze MS, Brun YV, den Bla­au­wen T, Bulghe­re­si S. 2018. Host-po­la­ri­zed cell growth in ani­mal sym­bi­onts. Current Biology 28(7): 1039-1051.e5. doi:10.1016/j.cub.2018.02.028

 

Pe­ter­sen JM, Kem­per A, Gruber-Vodicka H, Car­di­ni U, Geest M van der, Klei­ner M, Bulghe­re­si S, Muß­mann M, Her­bold C, Seah BKB, Antony CP, Liu D, Be­litz A, We­ber M. 2018. Aut­hor Cor­rec­tion: Che­mo­syn­the­tic sym­bi­onts of ma­ri­ne in­ver­te­bra­te ani­mals are ca­pa­ble of ni­tro­gen fixa­ti­on. Nature Microbiology 3: 961. doi:10.1038/s41564-018-0196-5

 

Pje­vac P, Mei­er DV, Mar­kert S, Hentsch­ker C, Schwe­der T, Be­cher D, Gruber-Vodicka HR, Rich­ter M, Bach W, Amann R, Mey­er­dier­ks A. 2018. Me­ta­pro­teo­ge­no­mic pro­filing of mi­cro­bi­al com­mu­nities co­lo­ni­zing ac­tive­ly ven­ting hydro­ther­mal chim­neys. Frontiers in Microbiology 9: 680. doi:10.3389/fmicb.2018.00680

 

Pu­en­tes-Cala E, Liebeke M, Mar­kert S, Har­der J. 2018a. An­ae­ro­bic de­gra­da­ti­on of bi­cy­clic mo­no­ter­pe­nes in Castellaniella defragrans. Metabolites 8(1): 12. doi:10.3390/metabo8010012

 

Pu­en­tes-Cala E, Liebeke M, Mar­kert S, Har­der J. 2018b. Li­mo­ne­ne de­hy­dro­ge­na­se hy­droxy­la­tes the al­ly­lic me­thyl group of cy­clic mo­no­ter­pe­nes in the an­ae­ro­bic ter­pe­ne de­gra­da­ti­on by Castellaniella defragrans. Journal of Biological Chemistry jbc.RA117.001557. doi:10.1074/jbc.RA117.001557

 

Ruff SE, Fel­den J, Gruber-Vodicka HR, Mar­con Y, Knit­tel K, Ra­met­te A, Boe­ti­us A. 2018. In situ de­ve­lop­ment of a me­tha­notro­phic mi­cro­bio­me in deep-sea se­di­ments. The ISME Journal 13: 197–213. doi:10.1038/s41396-018-0263-1

2017

Avcı B, Hahn­ke RL, Cha­fee M, Fi­scher T, Gruber‐Vodicka H, Te­get­mey­er HE, Har­der J, Fuchs BM, Amann RI, Tee­ling H. 2017. Ge­no­mic and phy­sio­lo­gi­cal ana­ly­ses of ‘Reinekea forsetii’ re­veal a ver­sa­ti­le op­por­tu­nis­tic life­style du­ring spring al­gae blooms. Environmental Microbiology 19:1209–1221. doi:10.1111/1462-2920.13646

 

Dubilier N. 2017. Big ques­ti­ons in mi­cro­bio­lo­gy - High tide for ma­ri­ne mi­cro­bes. Cell 169:771. doi:10.1016/j.cell.2017.05.009

 

Jäckle O. 2017. Mund- und darm­los in den Se­di­men­ten ma­ri­ner Tro­pen - Sym­bio­se mach­t’s mög­lich In: Hem­pel G, Hem­pel I, Hor­n­idge A-K, edi­tors. Klü­ger Nut­zen - Bes­ser Schüt­zen: Bre­mer For­schung an Tro­pi­schen Küs­ten. Bre­men, Ger­ma­ny: Edi­ti­on Fal­ken­berg. pp. 43–46.

 

Kreutzmann A-C, Dubilier N. 2017. Dunk­le En­er­gie: Sym­bio­sen zwi­schen Tie­ren und che­mo­syn­the­ti­schen Bak­te­ri­en In: Hem­pel G, Ha­gel W, Bi­schof K, edi­tors. Fas­zi­na­ti­on Mee­res­for­schung. Sprin­ger, Ber­lin, Hei­del­berg. pp. 231–244. doi:10.1007/978-3-662-49714-2_22

 

Leisch N, Pen­de N, We­ber PM, Gruber-Vodicka HR, Ver­heul J, Vi­scher NOE, Abby SS, Geier B, Bla­au­wen T den, Bulghe­re­si S. 2017. Asyn­chro­nous di­vi­si­on by non-ring FtsZ in the gam­ma­pro­te­ob­ac­te­ri­al sym­bi­ont of Robbea hypermnestra. Nature Microbiology 2:16182. doi:10.1038/nmicrobiol.2016.182

 

Pon­nu­du­rai R, Klei­ner M, Sayavedra L, Pe­ter­sen JM, Mo­che M, Otto A, Be­cher D, Takeu­chi T, Sa­toh N, Dubilier N, Schwe­der T, Mar­kert S. 2017a. Me­ta­bo­lic and phy­sio­lo­gi­cal in­ter­de­pen­den­cies in the Bathymodiolus azoricus sym­bio­sis. The ISME Journal 11:463–477. doi:10.1038/ismej.2016.124

 

Pon­nu­du­rai R, Sayavedra L, Klei­ner M, Hei­den SE, Thür­mer A, Fel­beck H, Schlü­ter R, Sie­vert SM, Da­ni­el R, Schwe­der T, Mar­kert S. 2017b. Ge­no­me se­quence of the sul­fur-oxi­di­zing Bathymodiolus thermophilus gill en­do­sym­bi­ont. Standards in Genomic Sciences 12:50. doi:10.1186/s40793-017-0266-y

 

Roch­fort S, Wyatt MA, Liebeke M, Sout­ham AD, Vi­ant MR, Bun­dy JG. 2017. Aro­ma­tic me­ta­bo­li­tes from the coelo­mic flu­id of Eisenia ear­thworm spe­cies. European Journal of Soil Biology 78:17–19. doi:10.1016/j.ejsobi.2016.11.008

 

Rubin-Blum M, Antony CP, Borowski C, Sayavedra L, Pape T, Sah­ling H, Bohr­mann G, Klei­ner M, Red­mond MC, Va­len­ti­ne DL, Dubilier N. 2017. Short-chain al­ka­nes fuel mus­sel and spon­ge Cycloclasticus sym­bi­onts from deep-sea gas and oil seeps. Nature Microbiology 2:17093. doi:10.1038/nmicrobiol.2017.93

 

Seah BKB, Schwa­ha T, Vol­land J-M, Hu­et­tel B, Dubilier N, Gruber-Vodicka HR. 2017. Spe­ci­fi­ci­ty in di­ver­si­ty: Sin­gle ori­gin of a wi­de­s­pre­ad ci­lia­te-bac­te­ria sym­bio­sis. Proceedings of the Royal Society B: Biological Sciences 284:20170764. doi:10.1098/rspb.2017.0764

 

Ta­vor­mi­na PL, Kel­ler­mann MY, Antony CP, To­che­va EI, Dal­le­s­ka NF, Jen­sen AJ, Va­len­ti­ne DL, Hin­richs K-U, Jen­sen GJ, Dubilier N, Or­phan VJ. 2017. Star­va­ti­on and re­co­very in the deep-sea me­tha­notroph Methyloprofundus sedimenti. Molecular Microbiology 103:242–252. doi:10.1111/mmi.13553

 

Ur­ba­ni­ak T, Soto M, Liebeke M, Ko­schek K. 2017. In­sight into the me­cha­nism of re­ver­si­ble ring-opening of 1,3-Ben­zo­xa­zi­ne with thiols. The Journal of Organic Chemistry 82:4050–4055. doi:10.1021/acs.joc.6b02727

 

Ver­ma A, Ojha AK, Pal Y, Ku­mari P, Schu­mann P, Gruber-Vodicka H, Dasta­ger SG, Na­ta­ra­jan RK, May­il­raj S, Krish­na­murthi S. 2017a. An in­ves­ti­ga­ti­on into the ta­xo­no­my of “Bacillus aminovorans” and its re­clas­si­fi­ca­ti­on to the ge­nus Domibacillus as Domibacillus aminovorans sp. nov. Systematic and Applied Microbiology 40:458–467. doi:10.1016/j.syapm.2017.07.003

 

Ver­ma A, Pal Y, Kha­tri I, Ojha AK, Gruber-Vodicka H, Schu­mann P, Dasta­ger S, Sub­ra­ma­ni­an S, May­il­raj S, Krish­na­murthi S. 2017b. Ex­ami­na­ti­on into the ta­xo­no­mic po­si­ti­on of Bacillus thermotolerans Yang et al., 2013, pro­po­sal for its re­clas­si­fi­ca­ti­on into a new ge­nus and spe­cies Quasibacillus thermotolerans gen. nov., comb. nov. and re­clas­si­fi­ca­ti­on of B. encimensis Dasta­ger et al., 2015 as a la­ter he­te­ro­ty­pic syn­onym of B. badius. Systematic and Applied Microbiology 40:411–422. doi:10.1016/j.syapm.2017.07.010

2016

Assié A, Borowski C, van der Heijden K, Rag­gi L, Geier B, Leisch N, Schimak MP, Dubilier N, Pe­ter­sen JM. 2016. A spe­ci­fic and wi­de­s­pre­ad as­so­cia­ti­on bet­ween deep-sea Bathymodiolus mus­sels and a no­vel fa­mi­ly of Ep­si­lon­pro­te­ob­ac­te­ria. Environmental Microbiology Reports 8:805–813. doi:10.1111/1758-2229.12442

 

Berg JS, Michellod D, Pje­vac P, Mar­ti­nez‐Pe­rez C, Buck­ner CRT, Hach PF, Schu­bert CJ, Mi­lucka J, Kuy­pers MMM. 2016. In­ten­si­ve cryp­tic mi­cro­bi­al iron cy­cling in the low iron wa­ter co­lumn of the mero­mic­tic Lake Ca­da­g­no. Environmental Microbiology 18:5288–5302. doi:10.1111/1462-2920.13587

 

Breu­sing C, Bi­as­toch A, Drews A, Me­ta­xas A, Jol­li­vet D, Vri­jen­ho­ek RC, Bay­er T, Melz­ner F, Sayavedra L, Pe­ter­sen JM, Dubilier N, Schil­ha­bel MB, Ro­sen­stiel P, Reusch TBH. 2016. Bio­phy­si­cal and po­pu­la­ti­on ge­ne­tic mo­dels pre­dict the pre­sence of “phan­tom” step­ping sto­nes con­nec­ting Mid-At­lan­tic Ridge vent eco­sys­tems. Current Biology 26:2257–2267. doi:10.1016/j.cub.2016.06.062

 

Ha­mann E, Gruber-Vodicka H, Klei­ner M, Te­get­mey­er HE, Rie­del D, Litt­mann S, Chen J, Mi­lucka J, Vieh­we­ger B, Be­cker KW, Dong X, Stairs CW, Hin­richs K-U, Brown MW, Ro­ger AJ, Strous M. 2016. En­vi­ron­men­tal Bre­via­tea har­bour mu­tua­lis­tic Arcobacter epi­bi­onts. Nature 534:254–258. doi:10.1038/nature18297

 

Hao J, Liebeke M, Som­mer U, Vi­ant MR, Bun­dy JG, Eb­bels TMD. 2016. Sta­tis­ti­cal cor­re­la­ti­ons bet­ween NMR spec­tro­sco­py and di­rect in­fu­si­on FT-ICR mass spec­tro­me­try aid an­no­ta­ti­on of un­k­nowns in me­ta­bo­lo­mics. Analytical Chemistry 88:2583–2589. doi:10.1021/acs.analchem.5b02889

 

Kreutzmann A-C, Schulz-Vogt HN. 2016. Oxi­da­ti­on of mole­cu­lar hy­dro­gen by a che­mo­li­tho­au­to­tro­phic Beggiatoa strain. Appl Environ Microbiol 82:2527–2536. doi:10.1128/AEM.03818-15

 

Kru­ken­berg V, Har­ding K, Rich­ter M, Glöck­ner FO, Gruber‐Vodicka HR, Adam B, Berg JS, Knit­tel K, Te­get­mey­er HE, Boe­ti­us A, We­ge­ner G. 2016. Candidatus Des­ul­fo­fer­vi­dus au­xi­l­ii, a hy­dro­ge­notro­phic sul­fa­te-re­du­cing bac­te­ri­um in­vol­ved in the ther­mo­phi­lic an­ae­ro­bic oxi­da­ti­on of me­tha­ne. Environmental Microbiology 18:3073–3091. doi:10.1111/1462-2920.13283

 

Leh­nen N, Mar­chant H, Schwedt A, Mi­lucka J, Lott C, We­ber M, De­ka­e­ze­ma­cker J, Seah BKB, Hach PF, Mohr W, Kuy­pers MMM. 2016. High ra­tes of mi­cro­bi­al din­i­tro­gen fixa­ti­on and sul­fa­te re­duc­tion as­so­cia­ted with the Me­di­ter­ra­ne­an se­agrass Posidonia oceanica. Systematic and Applied Microbiology 39:476–483. doi:10.1016/j.syapm.2016.08.004

 

Mei­er DV, Bach W, Gir­gu­is PR, Gruber‐Vodicka HR, Ree­ves EP, Rich­ter M, Vi­dou­dez C, Amann R, Mey­er­dier­ks A. 2016. He­te­ro­tro­phic Proteobacteria in the vicini­ty of dif­fu­se hydro­ther­mal ven­ting. Environmental Microbiology 18:4348–4368. doi:10.1111/1462-2920.13304

 

Mon­tana­ro J, Gru­ber D, Leisch N. 2016. Im­pro­ved ul­tra­struc­tu­re of ma­ri­ne in­ver­te­bra­tes using non-to­xic buf­fers. PeerJ 4:e1860. doi:10.7717/peerj.1860

 

Oka­mu­ra B, Gruhl A. 2016. Myxo­zoa + Po­ly­po­di­um: A com­mon rou­te to en­d­o­pa­ra­si­tism. Trends in Parasitology 32:268–271. doi:10.1016/j.pt.2016.01.007

 

Pe­ter­sen JM, Kem­per A, Gruber-Vodicka H, Car­di­ni U, van der Geest M, Klei­ner M, Bulghe­re­si S, Muß­mann M, Her­bold C, Seah BKB, Antony CP, Liu D, Be­litz A, We­ber M. 2016. Che­mo­syn­the­tic sym­bi­onts of ma­ri­ne in­ver­te­bra­te ani­mals are ca­pa­ble of ni­tro­gen fixa­ti­on. Nature Microbiology 2:16195. doi:10.1038/nmicrobiol.2016.195

 

Sah­ling H, Borowski C, Es­co­bar-Brio­nes E, Gay­tán-Ca­bal­le­ro A, Hsu C-W, Lo­her M, Mac­Do­nald I, Mar­con Y, Pape T, Rö­mer M, Rubin-Blum M, Schu­botz F, Sm­rz­ka D, We­ge­ner G, Bohr­mann G. 2016. Mas­si­ve asphalt de­po­sits, oil see­page, and gas ven­ting sup­port ab­un­dant che­mo­syn­the­tic com­mu­nities at the Cam­pe­che Knolls, sou­thern Gulf of Me­xi­co. Biogeosciences 13:4491–4512. doi:10.5194/bg-13-4491-2016

 

Schimak MP, Klei­ner M, Wetzel S, Liebeke M, Dubilier N, Fuchs BM. 2016. MiL-FISH: Mul­til­a­be­led oli­go­nu­cleo­ti­des for Fluo­re­scence In Situ Hy­bri­di­za­t­i­on im­pro­ve vi­sua­liza­t­i­on of bac­te­ri­al cells. Applied and Environmental Microbiology 82:62–70. doi:10.1128/AEM.02776-15

 

Spur­ge­on DJ, Liebeke M, An­der­son C, Kil­le P, Law­lor A, Bun­dy JG, La­hi­ve E. 2016. Eco­lo­gi­cal dri­vers in­flu­ence the dis­tri­bu­ti­ons of two cryp­tic li­neages in an ear­thworm mor­phos­pe­cies. Applied Soil Ecology 108:8–15. doi:10.1016/j.apsoil.2016.07.013

 

Wippler J, Klei­ner M, Lott C, Gruhl A, Abra­ham PE, Gi­an­no­ne RJ, Young JC, Het­tich RL, Dubilier N. 2016. Tran­scrip­to­mic and pro­teo­mic in­sights into in­na­te im­mu­ni­ty and ad­ap­ta­ti­ons to a sym­bio­tic life­style in the gut­less ma­ri­ne worm Olavius algarvensis. BMC Genomics 17:942. doi:10.1186/s12864-016-3293-y

 

Zimmermann J, Wentrup C, Sadowski M, Blazejak A, Gruber-Vodicka HR, Klei­ner M, Ott JA, Cron­holm B, De Wit P, Er­séus C, Dubilier N. 2016. Clo­se­ly cou­p­led evo­lu­tio­na­ry his­to­ry of ecto- and en­do­sym­bi­onts from two dis­tant­ly re­la­ted ani­mal phy­la. Molecular Ecology 25:3203–3223. doi:10.1111/mec.13554

 2015

Dubilier N, Mc­Fall-Ngai M, Zhao L. 2015. Mi­cro­bio­lo­gy: Crea­te a glo­bal mi­cro­bio­me ef­fort. Nature 526:631. doi:10.1038/526631a

 

Gruhl A. 2015. Myxo­zoa In: Wan­nin­ger A, edi­tor. Evo­lu­tio­na­ry De­ve­lop­men­tal Bio­lo­gy of In­ver­te­bra­tes 1. pp. 165–177. doi:10.1007/978-3-7091-1862-7_7

 

Gruhl A, Schwa­ha T. 2015. Bryo­zoa (Ec­toproc­ta) In: Schmidt-Rha­e­sa A, Harzsch S, Pursch­ke G, edi­tors. Struc­tu­re and Evo­lu­ti­on of In­ver­te­bra­te Ner­vous Sys­tems. Ox­ford Uni­ver­si­ty Press. pp. 325–340.

 

Klei­ner M, Wentrup C, Hol­ler T, La­vik G, Har­der J, Lott C, Litt­mann S, Kuy­pers MMM, Dubilier N. 2015. Use of car­bon mon­oxi­de and hy­dro­gen by a bac­te­ria-ani­mal sym­bio­sis from se­agrass se­di­ments: Role of CO and H2 in a ma­ri­ne sym­bio­sis. Environmental Microbiology 17:5023–5035. doi:10.1111/1462-2920.12912

 

Klo­se J, Polz MF, Wag­ner M, Schimak MP, Goll­ner S, Bright M. 2015. En­do­sym­bi­onts es­cape dead hydro­ther­mal vent tu­be­worms to en­rich the free-li­ving po­pu­la­ti­on. Proceedings of the National Academy of Sciences of the United States of America 112:11300–11305. doi:10.1073/pnas.1501160112

 

Liebeke M, Stritt­mat­ter N, Fe­arn S, Mor­gan AJ, Kil­le P, Fuch­ser J, Wal­lis D, Pal­chy­kov V, Ro­bert­son J, La­hi­ve E, Spur­ge­on DJ, Mc­Phail D, Takáts Z, Bun­dy JG. 2015. Uni­que me­ta­bo­li­tes pro­tect ear­thworms against plant po­ly­phe­nols. Nature Communications 6:7869. doi:10.1038/ncomms8869

 

Sayavedra L, Klei­ner M, Pon­nu­du­rai R, Wetzel S, Pel­le­tier E, Bar­be V, Sa­toh N, Sho­gu­chi E, Fink D, Breu­sing C, Reusch TB, Ro­sen­stiel P, Schil­ha­bel MB, Be­cher D, Schwe­der T, Mar­kert S, Dubilier N, Pe­ter­sen JM. 2015. Ab­un­dant to­xin-re­la­ted ge­nes in the ge­no­mes of be­ne­fi­ci­al sym­bi­onts from deep-sea hydro­ther­mal vent mus­sels. eLife 4:e07966. doi:10.7554/eLife.07966

 

Seah BKB, Gruber-Vodicka HR. 2015. gb­tools: In­ter­ac­tive vi­sua­liza­t­i­on of me­ta­ge­no­me bins in R. Frontiers in Microbiology 6:1451. doi:10.3389/fmicb.2015.01451

2014

Beinart RA, Ny­holm SV, Dubilier N, Gir­gu­is PR. 2014. In­tra­cel­lu­lar Oceanospirillales in­ha­bit the gills of the hydro­ther­mal vent snail Alviniconcha with che­mo­syn­the­tic, γ-Pro­te­ob­ac­te­ri­al sym­bi­onts. Environmental Microbiology Reports 6:656–664.

 

Fa­ger­vold SK, Ro­ma­no C, Ka­le­n­it­chen­ko D, Borowski C, Nunes-Jorge A, Mar­tin D, Ga­land PE. 2014. Mi­cro­bi­al com­mu­nities in sun­ken wood are struc­tu­red by wood-bo­ring bi­val­ves and lo­ca­ti­on in a sub­ma­ri­ne can­yon. PLoS ONE 9:e96248. doi:10.1371/journal.pone.0096248

 

Hao J, Liebeke M, Ast­le W, Io­rio MD, Bun­dy JG, Eb­bels TMD. 2014. Bay­e­si­an de­con­vo­lu­ti­on and quan­ti­fi­ca­ti­on of me­ta­bo­li­tes in com­plex 1D NMR spec­tra using BAT­MAN. Nature Protocols 9:1416–1427. doi:10.1038/nprot.2014.090

 

Jan C, Petersen JM, Wer­ner J, Tee­ling H, Huang S, Glöck­ner FO, Go­ly­shi­na OV, Dubilier N, Go­ly­shin PN, Jeb­bar M, Cam­bon-Bo­na­vi­ta M-A. 2014. The gill cham­ber epi­bio­sis of deep-sea shrimp Rimicaris exoculata: An in-depth me­ta­ge­no­mic in­ves­ti­ga­ti­on and dis­co­very of Zetaproteobacteria. Environmental Microbiology 16:2723–2738. doi:10.1111/1462-2920.12406

 

Ko­sch­in­sky A, Kausch M, Borowski C. 2014. Me­tal con­cen­tra­ti­ons in the tis­su­es of the hydro­ther­mal vent mus­sel Bathymodiolus: Re­flec­tion of dif­fe­rent me­tal sour­ces. Marine Environmental Research 95:62–73. doi:10.1016/j.marenvres.2013.12.012

 

Mora-Lugo R, Zimmermann J, Rizk AM, Fer­nan­dez-La­ho­re M. 2014. De­ve­lop­ment of a trans­for­ma­ti­on sys­tem for Aspergillus sojae ba­sed on the Agrobacterium tumefaciens-me­dia­ted ap­proach. BMC Microbiology 14:247. doi:10.1186/s12866-014-0247-x

 

Ott JA, Gruber-Vodicka HR, Leisch N, Zimmermann J. 2014a. Phy­lo­ge­ne­tic con­fir­ma­ti­on of the ge­nus Robbea (Ne­ma­to­da: Des­mo­do­ri­dae, Stil­bone­ma­ti­nae) with the de­scrip­ti­on of three new spe­cies. Systematics and Biodiversity 12:434–455. doi:10.1080/14772000.2014.941038

 

Ott JA, Leisch N, Gruber-Vodicka HR. 2014b. Eubostrichus fertilis sp. n., a new ma­ri­ne ne­ma­to­de (Des­mo­do­ri­dae: Stil­bone­ma­ti­nae) with an ex­tra­or­di­na­ry re­pro­duc­tive po­ten­ti­al from Be­li­ze, Cen­tral Ame­ri­ca. Nematology 16:777–787. doi:10.1163/15685411-00002807

 

Pen­de N, Leisch N, Gruber-Vodicka HR, Heindl NR, Ott J, den Bla­au­wen T, Bulghe­re­si S. 2014. Size-in­de­pen­dent sym­metric di­vi­si­on in ex­tra­or­di­na­ri­ly long cells. Nature Communications 5:4803. doi:10.1038/ncomms5803

 

Petersen J, Dubilier N. 2014. Gene swap­ping in the dead zone. eLife 3:e04600. doi:10.7554/eLife.04600

 

Rus­sell JA, Dubilier N, Rud­gers JA. 2014. Na­tu­re’s mi­cro­bio­me: In­tro­duc­tion. Molecular Ecology 23:1225–1237. doi:10.1111/mec.12676

 

Wentrup C, Wen­de­berg A, Schimak M, Borowski C, Dubilier N. 2014. Fo­re­ver com­pe­tent: Deep-sea bi­val­ves are co­lo­ni­zed by their che­mo­syn­the­tic sym­bi­onts throughout their life­time. Environmental Microbiology 16:3699–3713. doi:10.1111/1462-2920.12597

 2013

Kleiner M, Young JC, Shah M, Ver­Berk­moes NC, Dubilier N. 2013. Me­ta­pro­teo­mics re­veals ab­un­dant trans­po­sa­se ex­pres­si­on in mu­tua­lis­tic en­do­sym­bi­onts. mBio 4:e00223-13-e00223-13. doi:10.1128/mBio.00223-13

 

Mar­con Y, Sah­ling H, Borowski C, dos San­tos Fer­rei­ra C, Thal J, Bohr­mann G. 2013. Me­gafau­nal dis­tri­bu­ti­on and as­sess­ment of to­tal me­tha­ne and sul­fi­de con­sump­ti­on by mus­sel beds at Me­nez Gwen hydro­ther­mal vent, ba­sed on geo-re­fe­ren­ced pho­to­mo­saics. Deep Sea Research Part I: Oceanographic Research Papers 75:93–109. doi:10.1016/j.dsr.2013.01.008

 

Mc­Fall-Ngai M, Had­field MG, Bosch TCG, Ca­rey HV, Do­ma­zet-Lošo T, Dou­glas AE, Dubilier N, Eberl G, Fu­ka­mi T, Gil­bert SF, Hent­schel U, King N, Kjel­l­e­berg S, Knoll AH, Kre­mer N, Maz­ma­ni­an SK, Met­calf JL, Ne­al­son K, Pier­ce NE, Rawls JF, Reid A, Ruby EG, Rum­pho M, San­ders JG, Tautz D, Wer­ne­green JJ. 2013. Ani­mals in a bac­te­ri­al world, a new im­pe­ra­ti­ve for the life sci­en­ces. Proceedings of the National Academy of Sciences 110:3229–3236. doi:10.1073/pnas.1218525110

 

Rag­gi L, Schu­botz F, Hin­richs K-U, Dubilier N, Petersen JM. 2013. Bac­te­ri­al sym­bi­onts of Bathymodiolus mus­sels and Escarpia tu­be­worms from Cha­po­po­te, an asphalt seep in the sou­thern Gulf of Me­xi­co. Environmental Microbiology 15:1969–1987. doi:10.1111/1462-2920.12051

 

Wentrup C, Wen­de­berg A, Huang JY, Borowski C, Dubilier N. 2013. Shift from wi­de­s­pre­ad sym­bi­ont in­fec­tion of host tis­su­es to spe­ci­fic co­lo­niza­t­i­on of gills in ju­ve­ni­le deep-sea mus­sels. The ISME Journal 7:1244–1247. doi:10.1038/ismej.2013.5

 2012

Gros O, Eli­sa­beth NH, Gus­t­ave SDD, Caro A, Dubilier N. 2012. Plas­ti­ci­ty of sym­bi­ont ac­qui­si­ti­on throughout the life cy­cle of the shal­low-wa­ter tro­pi­cal lu­ci­nid Codakia orbiculata (Mol­lu­s­ca: Bi­val­via). Environmental Microbiology 14:1584–1595. doi:10.1111/j.1462-2920.2012.02748.x

 

Kel­ler­mann MY, Schu­botz F, El­vert M, Lipp JS, Bir­gel D, Prieto-Mol­lar X, Dubilier N, Hin­richs K-U. 2012. Sym­bi­ont–host re­la­ti­ons­hips in che­mo­syn­the­tic mus­sels: A com­pre­hen­si­ve li­pid bio­mar­ker stu­dy. Organic Geochemistry 43:112–124. doi:10.1016/j.orggeochem.2011.10.005

 

Kleiner M, Petersen JM, Dubilier N. 2012. Con­ver­gent and di­ver­gent evo­lu­ti­on of me­ta­bo­lism in sul­fur-oxi­di­zing sym­bi­onts and the role of ho­ri­zon­tal gene trans­fer. Current Opinion in Microbiology 15:621–631. doi:10.1016/j.mib.2012.09.003

 

Kleiner M., Wentrup C, Lott C, Tee­ling H, Wetzel S, Young J, Chang Y-J, Shah M, Ver­Berk­moes NC, Zar­zy­cki J, Fuchs G, Mar­kert S, Hem­pel K, Voigt B, Be­cher D, Liebeke M, Lalk M, Al­brecht D, He­cker M, Schwe­der T, Dubilier N. 2012. Me­ta­pro­teo­mics of a gut­less ma­ri­ne worm and its sym­bio­tic mi­cro­bi­al com­mu­ni­ty re­veal unusu­al pa­thways for car­bon and en­er­gy use. Proceedings of the National Academy of Sciences 109:E1173–E1182. doi:10.1073/pnas.1121198109

 

Petersen JM, Wentrup C, Verna C, Knit­tel K, Dubilier N. 2012. Orig­ins and evo­lu­tio­na­ry fle­xi­bi­li­ty of che­mo­syn­the­tic sym­bi­onts from deep-sea ani­mals. The Biological Bulletin 223:123–137. doi:10.1086/BBLv223n1p123

 

van der Heijden K, Petersen JM, Dubilier N, Borowski C. 2012. Ge­ne­tic con­nec­tivi­ty bet­ween North and South Mid-At­lan­tic Ridge che­mo­syn­the­tic bi­val­ves and their sym­bi­onts. PLoS ONE 7:e39994. doi:10.1371/journal.pone.0039994

 

Wen­de­berg A, Zielinski FU, Borowski C, Dubilier N. 2012. Ex­pres­si­on pat­terns of mR­NAs for me­tha­notro­phy and thio­tro­phy in sym­bi­onts of the hydro­ther­mal vent mus­sel Bathymodiolus puteoserpentis. The ISME Journal 6:104–112. doi:10.1038/ismej.2011.81

 2011

Hüg­ler M, Petersen JM, Dubilier N, Im­hoff JF, Sie­vert SM. 2011. Pa­thways of car­bon and en­er­gy me­ta­bo­lism of the epi­bio­tic com­mu­ni­ty as­so­cia­ted with the deep-sea hydro­ther­mal vent shrimp Rimicaris exoculata. PLoS ONE 6:e16018. doi:10.1371/journal.pone.0016018

 

Kleiner M, Woy­ke T, Ruehland C, Dubilier N. 2011. The Olavius algarvensis me­ta­ge­no­me re­vi­si­ted: Les­sons lear­ned from the ana­ly­sis of the low-di­ver­si­ty mi­cro­bi­al con­sor­ti­um of a gut­less ma­ri­ne worm In: de Brui­jn FJ, edi­tor. Hand­book of Mole­cu­lar Mi­cro­bi­al Eco­lo­gy II. Ho­bo­ken, NJ, USA: John Wi­ley & Sons, Inc. pp. 319–333. doi:10.1002/9781118010549.ch32

 

Petersen JM, Zielinski FU, Pape T, Sei­fert R, Mora­ru C, Amann R, Hour­dez S, Gir­gu­is PR, Wan­kel SD, Bar­be V, Pel­le­tier E, Fink D, Borowski C, Bach W, Dubilier N. 2011. Hy­dro­gen is an en­er­gy sour­ce for hydro­ther­mal vent sym­bio­ses. Nature 476:176–180. doi:10.1038/nature10325

 

Zielinski FU, Gen­ne­rich H-H, Borowski C, Wenz­hö­fer F, Dubilier N. 2011. In situ mea­su­re­ments of hy­dro­gen sul­fi­de, oxy­gen, and tem­pe­ra­tu­re in dif­fu­se fluids of an ul­tra­ma­fic-hosted hydro­ther­mal vent field (Lo­gat­chev, 14°45′N, Mid-At­lan­tic Ridge): Im­pli­ca­ti­ons for che­mo­sym­bio­tic ba­thy­mo­dio­lin mus­sels. Geochemistry, Geophysics, Geosystems 12:Q0A­E04. doi:10.1029/2011GC003632

 

2010

Petersen JM, Dubilier N. 2010. Sym­bio­tic me­tha­ne oxi­di­zers In: Tim­mis KN, edi­tor. Hand­book of Hy­dro­c­ar­bon and Li­pid Mi­cro­bio­lo­gy. Sprin­ger, Ber­lin, Hei­del­berg. pp. 1977–1996. doi:10.1007/978-3-540-77587-4_145

 

Petersen JM, Ra­met­te A, Lott C, Cam­bon‐Bo­na­vi­ta M-A, Zbin­den M, Dubilier N. 2010. Dual sym­bio­sis of the vent shrimp Rimicaris exoculata with fil­amen­tous gam­ma- and ep­si­lon­pro­te­ob­ac­te­ria at four Mid-At­lan­tic Ridge hydro­ther­mal vent fiel­ds. Environmental Microbiology 12:2204–2218. doi:10.1111/j.1462-2920.2009.02129.x

 

Rühland C, Dubilier N. 2010. Gam­ma- and ep­si­lon­pro­te­ob­ac­te­ri­al ec­to­sym­bi­onts of a shal­low-wa­ter ma­ri­ne worm are re­la­ted to deep-sea hydro­ther­mal vent ec­to­sym­bi­onts. Environmental Microbiology 12:2312–2326. doi:10.1111/j.1462-2920.2010.02256.x

 

Verna C, Ra­met­te A, Wik­lund H, Dah­l­gren TG, Gl­over AG, Gaill F, Dubilier N. 2010. High sym­bi­ont di­ver­si­ty in the bone-ea­ting worm Osedax mucofloris from shal­low wha­le-falls in the North At­lan­tic. Environmental Microbiology 12:2355–2370. doi:10.1111/j.1462-2920.2010.02299.x

 

Zielinski F, Dubilier N. 2010. Der Eu­k­a­ryo­ten-Zell­kern als öko­lo­gis­che Nis­che für Bak­ter­ien. BIOspektrum 01.10:12–15.

 2009

Petersen JM, Dubilier N. 2009. Me­tha­notro­phic sym­bio­ses in ma­ri­ne in­ver­te­bra­tes. Environmental Microbiology Reports 1:319–335. doi:10.1111/j.1758-2229.2009.00081.x

 

Zielinski FU, Perntha­ler A, Duperron S, Rag­gi L, Gie­re O, Borowski C, Dubilier N. 2009. Wi­de­s­pre­ad oc­cur­rence of an in­tra­nu­cle­ar bac­te­ri­al pa­ra­si­te in vent and seep ba­thy­mo­dio­lin mus­sels. Environmental Microbiology 11:1150–1167. doi:10.1111/j.1462-2920.2008.01847.x

 2008

Dubilier N, Bergin C, Lott C. 2008. Sym­bio­tic di­ver­si­ty in ma­ri­ne ani­mals: The art of har­n­es­sing che­mo­syn­the­sis. Nature Reviews Microbiology 6:725–740. doi:10.1038/nrmicro1992

 

Lö­se­kann T, Ro­ba­dor A, Nie­mann H, Knit­tel K, Boe­ti­us A, Dubilier N. 2008. En­do­sym­bio­ses bet­ween bac­te­ria and deep-sea si­bog­li­nid tu­be­worms from an Arc­tic Cold Seep (Haa­kon Mos­by Mud Vol­ca­no, Ba­rents Sea). Environmental Microbiology 10:3237–3254. doi:10.1111/j.1462-2920.2008.01712.x

 

Mar­tí­nez‐Gar­cía M, Stief P, Díaz‐Val­dés M, Wan­ner G, Ra­mos‐Es­plá A, Dubilier N, An­tón J. 2008. Am­mo­nia-oxi­di­zing Cren­ar­chaeo­ta and ni­tri­fi­ca­ti­on in­si­de the tis­sue of a co­lo­ni­al asci­di­an. Environmental Microbiology 10:2991–3001. doi:10.1111/j.1462-2920.2008.01761.x

 

Rühland C, Blazejak A, Lott C, Loy A, Er­séus C, Dubilier N. 2008. Mul­ti­ple bac­te­ri­al sym­bi­onts in two spe­cies of co-oc­cur­ring gut­less oli­gochae­te worms from Me­di­ter­ra­ne­an sea grass se­di­ments. Environmental Microbiology 10:3404–3416. doi:10.1111/j.1462-2920.2008.01728.x

 2007

Dubilier N. 2007. The se­arch­light and the bu­cket of mi­cro­bi­al eco­lo­gy. Environmental Microbiology 9:2–3. doi:10.1111/j.1462-2920.2006.01222_2.x

 

Duperron S, Si­buet M, MacG­re­gor BJ, Kuy­pers MMM, Fis­her CR, Dubilier N. 2007. Di­ver­si­ty, re­la­ti­ve ab­un­dance and me­ta­bo­lic po­ten­ti­al of bac­te­ri­al en­do­sym­bi­onts in three Bathymodiolus mus­sel spe­cies from cold seeps in the Gulf of Me­xi­co. Environmental Microbiology 9:1423–1438. doi:10.1111/j.1462-2920.2007.01259.x

 

Haa­se KM, Pe­ter­sen S, Ko­sch­in­sky A, Sei­fert R, De­vey CW, Keir R, Lack­sche­witz KS, Mel­chert B, Per­ner M, Schma­le O, Sü­ling J, Dubilier N, Zielinski F, Fretz­dorff S, Gar­be‐Schön­berg D, Wes­tern­strö­er U, Ger­man CR, Shank TM, Yo­er­ger D, Gie­re O, Kue­ver J, Marb­ler H, Ma­wick J, Mer­tens C, Stö­ber U, Wal­ter M, Os­ter­tag‐Hen­ning C, Paulick H, Pe­ters M, Strauss H, San­der S, Ste­cher J, War­muth M, We­ber S. 2007. Young vol­ca­nism and re­la­ted hydro­ther­mal ac­tivi­ty at 5°S on the slow-sprea­ding sou­thern Mid-At­lan­tic Ridge. Geochemistry, Geophysics, Geosystems 8:Q11002. doi:10.1029/2006GC001509

 

Musat N, Gie­re O, Gie­se­ke A, Thier­mann F, Amann R, Dubilier N. 2007. Mole­cu­lar and mor­pho­lo­gi­cal cha­rac­te­riza­t­i­on of the as­so­cia­ti­on bet­ween bac­te­ri­al en­do­sym­bi­onts and the ma­ri­ne ne­ma­to­de Astomonema sp. from the Ba­ha­mas. Environmental Microbiology 9:1345–1353. doi:10.1111/j.1462-2920.2006.01232.x

 

Per­nice M, Wetzel S, Gros O, Bou­cher-Rodo­ni R, Dubilier N. 2007. Enig­ma­tic dual sym­bio­sis in the ex­cre­to­ry or­gan of Nautilus macromphalus (Ce­pha­lo­po­da: Nau­ti­lo­idea). Proceedings Biological Sciences 274:1143–1152. doi:10.1098/rspb.2006.0353

 

Pra­dil­lon F, Schmidt A, Pe­plies J, Dubilier N. 2007. Spe­cies iden­ti­fi­ca­ti­on of ma­ri­ne in­ver­te­bra­te ear­ly sta­ges by who­le-lar­vae in situ hy­bri­di­sa­ti­on of 18S ri­bo­so­mal RNA. Marine Ecology Progress Series 333:103–116. doi:10.3354/meps333103

 2006

Blazejak A, Kue­ver J, Er­seus C, Amann R, Dubilier N. 2006. Phy­lo­ge­ny of 16S rRNA, Ri­bu­lo­se 1,5-Bis­phos­pha­te car­boxy­la­se/​oxy­ge­na­se, and Ade­no­si­ne 5’-Phos­pho­sul­fa­te re­duc­ta­se ge­nes from gam­ma- and al­pha­pro­te­ob­ac­te­ri­al sym­bi­onts in gut­less ma­ri­ne worms (Oli­gochae­ta) from Ber­mu­da and the Ba­ha­mas. Applied and Environmental Microbiology 72:5527–5536. doi:10.1128/AEM.02441-05

 

da Sil­va SG, Gil­lan D, Dubilier N, Ridder C. 2006. Cha­rac­te­riza­t­i­on by 16S rRNA gene ana­ly­sis and in situ hy­bri­di­za­t­i­on of bac­te­ria li­ving in the hind­gut of a de­po­sit-fee­ding echi­no­id (Echi­n­oder­ma­ta). Journal of the Marine Biological Association of the United Kingdom 86:1209–1213. doi:10.1017/S0025315406014202

 

Duperron S, Bergin C, Zielinski F, Blazejak A, Perntha­ler A, McKi­ness ZP, De­Chai­ne E, Ca­va­n­augh CM, Dubilier N. 2006. A dual sym­bio­sis sha­red by two mus­sel spe­cies, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bi­val­via: My­ti­li­dae), from hydro­ther­mal vents along the nort­hern Mid-At­lan­tic Ridge. Environmental Microbiology 8:1441–1447. doi:10.1111/j.1462-2920.2006.01038.x

 

Musat N, Wer­ner U, Knit­tel K, Kolb S, Do­den­hof T, van Beu­se­kom JEE, de Beer D, Dubilier N, Amann R. 2006. Mi­cro­bi­al com­mu­ni­ty struc­tu­re of san­dy in­terti­dal se­di­ments in the North Sea, Sylt-Rømø Ba­sin, Wad­den Sea. Systematic and Applied Microbiology 29:333–348. doi:10.1016/j.syapm.2005.12.006

 

Rühland C, Bergin C, Lott C, Dubilier N. 2006. Darm­lo­se ma­ri­ne Wür­mer: Sym­bio­sen mit mi­kro­bi­el­len Kon­sor­ti­en. BIOspektrum 12:600–602.

 

Woy­ke T, Tee­ling H, Iva­no­va NN, Hun­te­mann M, Rich­ter M, Gloeck­ner FO, Bof­fel­li D, An­der­son IJ, Bar­ry KW, Shapi­ro HJ, Sze­to E, Kyr­pi­des NC, Muss­mann M, Amann R, Bergin C, Rühland C, Ru­bin EM, Dubilier N. 2006. Sym­bio­sis in­sights through me­ta­ge­no­mic ana­ly­sis of a mi­cro­bi­al con­sor­ti­um. Nature 443:950–955. doi:10.1038/nature05192

 

2005 Blazejak A, Er­seus C, Amann R, Dubilier N. 2005. Co­exis­tence of bac­te­ri­al sul­fi­de-oxi­di­zers, sul­fa­te-re­du­cers, and spi­ro­che­tes in a gut­less worm (Oli­gochae­ta) from the Peru Mar­gin. Applied and Environmental Microbiology 71:1553–1561. doi:10.1128/AEM.71.3.1553-1561.2005
 

de Beer D, Wenz­hö­fer F, Fer­de­l­man TG, Boeh­me SE, Hu­et­tel M, Beu­se­kom JEE van, Bött­cher ME, Musat N, Dubilier N. 2005. Trans­port and mi­ne­ra­liza­t­i­on ra­tes in North Sea san­dy in­terti­dal se­di­ments, Sylt-Rømø Ba­sin, Wad­den Sea. Limnology and Oceanography 50:113–127. doi:10.4319/lo.2005.50.1.0113

 

Dubilier N, Blazejak A, Rühland C. 2005. Sym­bio­ses bet­ween bac­te­ria and gut­less ma­ri­ne oli­gochae­tes In: Over­mann J, edi­tor. Mole­cu­lar Ba­sis of Sym­bio­sis. New York: Sprin­ger. pp. 251–275.

 

Duperron S, Na­da­lig T, Ca­prais J-C, Si­buet M, Fia­la-Mé­dio­ni A, Amann R, Dubilier N. 2005. Dual sym­bio­sis in a Bathymodiolus sp. mus­sel from a me­tha­ne seep on the Ga­bon Con­ti­nen­tal Mar­gin (Sou­theast At­lan­tic): 16S rRNA phy­lo­ge­ny and dis­tri­bu­ti­on of the sym­bi­onts in gills. Applied and Environmental Microbiology 71:1694–1700. doi:10.1128/AEM.71.4.1694-1700.2005

 

Ur­a­ka­wa H, Dubilier N, Fu­ji­wa­ra Y, Cun­ningham DE, Ko­ji­ma S, Stahl DA. 2005. Hydro­ther­mal vent gastro­pods from the same fa­mi­ly (Pro­van­n­i­dae) har­bour ep­si­lon- and gam­ma-pro­te­ob­ac­te­ri­al en­do­sym­bi­onts. Environmental Microbiology 7:750–754. doi:10.1111/j.1462-2920.2005.00753.x

2004

Dubilier N. 2004. Mul­ti­ple bac­ter­ial en­do­sym­bi­onts in gut­less mar­ine worms: com­pet­it­ors or part­ners? Nova Acta Leopoldina NF 88:107–112.

 

Gil­lan DC, Dubilier N. 2004. No­vel epi­bio­tic Thiothrix bac­te­ri­um on a ma­ri­ne am­phi­pod. Applied and Environmental Microbiology 70:3772–3775. doi:10.1128/AEM.70.6.3772-3775.2004

 2001 Dubilier N, Mül­ders C, Fer­de­l­man T, de Beer D, Perntha­ler A, Klein M, Wag­ner M, Er­séus C, Thier­mann F, Krie­ger J, Gie­re O, Amann R. 2001. En­do­sym­bio­tic sulp­ha­te-re­du­cing and sulphi­de-oxi­di­zing bac­te­ria in an oli­gochae­te worm. Nature 411:298–302. doi:10.1038/35077067
2000

Krie­ger J, Gie­re O, Dubilier N. 2000. Lo­ca­liza­t­i­on of Ru­bis­CO and sul­fur in en­do­sym­bio­tic bac­te­ria of the gut­less ma­ri­ne oli­gochae­te Inanidrilus leukodermatus (An­ne­l­i­da). Marine Biology 137:239–244.

1999

Dubilier N, Amann R, Er­séus C, Muy­zer G, Park S, Gie­re O, Ca­va­n­augh CM. 1999. Phy­lo­ge­ne­tic di­ver­si­ty of bac­te­ri­al en­do­sym­bi­onts in the gut­less ma­ri­ne oli­go­che­te Olavius loisae (An­ne­l­i­da). Marine Ecology Progress Series 178:271–280.

 

Gie­re O, Preus­se J-H, Dubilier N. 1999. Tubificoides benedii (Tu­bi­fi­ci­dae, Oli­gochae­ta) – a pioneer in hy­po­xic and sul­fi­dic en­vi­ron­ments. An over­view of ad­ap­ti­ve pa­thways. Hydrobiologia 406:235–241. doi:10.1023/A:1003711914788

1995

Dubilier N, Gie­re O, Dis­tel DL, Ca­va­n­augh CM. 1995a. Cha­rac­te­riza­t­i­on of che­mo­a­u­to­tro­phic bac­te­ri­al sym­bi­onts in a gut­less ma­ri­ne worm Oli­gochae­ta, An­ne­l­i­da) by phy­lo­ge­ne­tic 16S rRNA se­quence ana­ly­sis and in situ hy­bri­di­za­t­i­on. Applied and Environmental Microbiology 61:2346–2350.

 

Dubilier N, Gie­re O, Gries­ha­ber MK. 1995b. Mor­pho­lo­gi­cal and eco­phy­sio­lo­gi­cal ad­ap­ta­ti­ons of the ma­ri­ne Oli­gochae­te Tubificoides benedii to sul­fi­dic se­di­ments. American Zoologist 35:163–173.

1988

Dubilier N. 1988. H2S—A set­t­le­ment cue or a to­xic sub­stan­ce for Capitella sp. I lar­vae? The Biological Bulletin 174:30–38. doi:10.2307/1541756

 

Gie­re O, Rho­de B, Dubilier N. 1988. Struc­tu­ral pe­cu­li­a­ri­ties of the body wall of Tubificoides benedii (Oli­gochae­ta) and pos­si­ble re­la­ti­ons to its life in sulph­idic se­di­ments. Zoomorphology 108:29–39. doi:10.1007/BF00312212

 

PhD Students

  • Målin Tietjen (2021) "Physiology and ecology of deep-sea Bathymodiolus symbioses". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Miguel Ángel González Porras (2020) "Molecular biology and evolution of the bacterial intranuclear parasite Ca. Endonucleobacter". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Benedikt Geier (2020) "Correlative mass spectrometry imaging of animal-microbe symbioses". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Rebecca Ansorge (2019) "Strain diversity and evolution in endosymbionts of Bathymodiolus mussels". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Oliver Jäckle (2018) "Evolution and physiology of the Paracatenula symbiosis". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Brandon K. B. Seah (2017) "The bacterial ectosymbionts of the ciliate Kentrophoros". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Lizbeth Sayavedra Camacho (2016) "Host-symbiont interactions and metabolism of chemosynthetic symbiosis in deep-sea Bathymodiolus mussels". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Adrien Assié (2016) “Deep se(a)quencing: A study of deep-sea ectosymbioses using next generation sequencing". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Juliane Wippler (2016) “Characterization of host-symbiont molecular interactions and evolutionary relationships in the gutless oligochaete Olavius algarvensis". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Mario Schimak (2016) "Transmission of bacterial symbionts in the gutless oligochaete Olavius algarvensis. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Judith Zimmermann (2015) "Diversity, specificity and evolutionary history of marine invertebrate symbioses and functions of the sulfur-oxidizing symbionts". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Manuel Kleiner (2012) "Metabolism and evolutionary ecology of chemosynthetic symbionts from marine invertebrates". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Cecilia Wentrup (2012) "Acquisition and Activity of Bacterial Symbionts in Marine Invertebrates". Fachbereich Biologie/Chemie, University of Bremen
  • Dennis Fink (2011) "Dynamics of Symbiont Abundance in Bathymodiolin Deep-Sea Symbioses". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Caroline Verna (2010) “Phylogeny and Diversity of Symbionts from Whale Fall Invertebrates”. International Max Planck Research School for Marine Microbiology, University of Bremen and University of Pierre and Marie Curie, Paris
  • Caroline Ruehland (2010) "Characterization of Bacterial Ecto- and Endosymbionts of Oligochaete Worms from Marine Sediments: Phylogeny and Metabolic Potential". Fachbereich Biologie/Chemie, University of Bremen
  • Luciana Raggi (2010) "Bacterial – Invertebrate Symbioses: From an Asphalt Cold Seep to Shallow Waters". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Jillian Petersen-Struck (2009) “Biogeography of bacterial symbionts from hydrothermal vent shrimp and mussels”. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Claudia Bergin (2009) "Molecular physiology of bacterial symbionts in gutless marine oligochaetes". Fachbereich Biologie/Chemie, University of Bremen.
  • Frank Zielinski (2008) "Geobiological coupling of hydrothermal vent fluids with endosymbiotic primary producers of Bathymodiolus mussels from hydrothermal vents on the Mid-Atlantic Ridge”. Fachbereich Biologie/Chemie, University of Bremen.
  • Niculina Musat (2006) "Molecular characterization of symbiotic associations between chemoautotrophic sulfur-oxidizing microorganisms and nematodes in shallow marine sediments". Fachbereich Biologie/Chemie, University of Bremen.
  • Sébastien Duperron (2005) "Bacterial symbioses in mytilid bivalves associated with cold seeps and hydrothermal vents: diversity, nutritional role, and influence of the environment". University of Paris 6, France. Joint PhD with Myriam Sibuet (IFREMER, France)
  • Anna Blazejak (2005) "Phylogenetic and functional characterization of symbiotic bacteria in gutless marine worms (Annelida, Oligochaeta)”. Fachbereich Biologie/Chemie, University of Bremen.

MSc Students

  • Hagen Buck-Wiese (2019)
  • Svenja Diester (2019) "Symbiont digestion in the gutless oligochaete Olavius algarvensis". Carl von Ossietzky University of Oldenburg.
  • Marius Poulain (2019) "Functional and comparative genomic analyses of the Delta4-proteobacterial symbionts of gutless oligochaetes". Université Paris Sud.
  • Patric Bourceau (2019) "Combining mass spectrometry, chemoinformatics and bioinformatics to elucidate the metabolism of unusual phosphorous compounds in host-symbiont systems". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Caroline Zeidler (2019) "Bioplastic-eating animals: Polyhydroxyalkanoate-degrading enzymes in a chemosymbiotic worm". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Alaina Weinheimer (2018) "Investigating the virome associated with the symbiosis between deep sea Bathymodiolus mussels and their chemosynthetic microbial partners". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Tina Enders (2017) “Role of carbon monoxide in the biogeochemistry of Posidonia oceanica seagrass peat". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Maximillian Franke (2017) “Symbiont colonization in early developmental stages of the deep-sea mussel Bathymodiolus puteoserpentis". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Merle Ücker (2017) “Understanding microbial symbioses in bathymodiolin hybrid host species using metagenomics". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Moritz Janda (2017) “Mass spectrometry imaging based metabolomics of host-microbe interactions in marine invertebrates”. University of Bremen.
  • Anna Mankowski (2017) “Comparative and functional genomics of deltaproteobacterial symbionts of gutless oligochaetes". University of Bremen.
  • Pierre Methou (2016) “Expression of Olavius algarvensis respiratory pigments revealed through mRNA whole-mount in situ hybridization”. Master Sciences de l’Univers, Environnement, Ecologie Spécialité : EcoPhysiologie et EcoToxicologie.
  • Dolma Michellod (2016) "Metabolic analyses of symbioses between chemoautotrophic bacteria and marine invertebrates". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Miriam Brandt (2015) "Characterization and comparative study of the chemosynthethic symbiosis in gutless marine oligochaetes from Belize and Bermuda". University of Bremen.
  • Miguel Angel Gonzalez Porras (2015) "Probing the complexity of a deep-sea symbiosis: Establishing geneFISH as a technique to image symbiont strain-specific differences in metabolic potential". International MSc in Marine Biodiversity and Conservation. MSc program of consortium of 6 European universities.
  • Benedikt Geier (2015) "A correlative approach for combining multimodal imaging techniques in a 3D scenario". External student from the LMU Munich.
  • Anna Kemper (2015) "Symbiont metabolic potential and host symbiont interactions in the lucinid chemosynthetic symbiosis from Elba, Italy. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Rahel Yemanaberhan (2015) "Carbon incorporation and transfer in marine symbiotic worms". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Rebecca Ansorge (2014) “Strain diversity and genome evolution in chemoautotrophic symbionts of Bathymodiolus mussels”. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Oliver Jäckle (2014) “Experimental molecular and biochemical characterization of the Paracatenula symbiosis”. International Max Planck Research School for Marine Microbiology, University of Bremen
  • Kwee Boon Brandon Seah (2013) “Bacterial ectosymbionts of the ciliate Kentrophoros”. International Max Planck Research School for Marine Microbiology. University of Bremen
  • Miriam Sadowski (2013) “Molecular characterization of ectosymbiotic bacteria from nematodes in a shallow water system”. International Max Planck Research School for Marine Microbiology. University of Bremen
  • Laura Gallego Valle (2012) "Microdiversity in host-associated and free-living symbionts of Bathymodiolus mussels from Mid-Atlantic Ridge". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Lizbeth Sayavedra Camacho (2012) "Comparative genomics of symbiotic and free-living chemoautotrophic bacteria". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Juliane Wippler (2011) "Analysis of mobile DNA in endosymbionts of the gutless marine oligochaete worm Olavius algarvensis". International Max Planck Research School for Marine Microbiology. University of Bremen.
  • Judith Zimmermann (2010) "Molecular characterization of a vestimentiferan tubeworm and its endosymbiotic bacteria from a hydrothermal vent in the Mediterranean Sea". University of Bremen.
  • Dennis Fink (2008) “Distribution, abundance and productivity of endosymbionts in the deep-sea mussel Bathymodiolus”. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Karina Röse (2008) “Symbiosis between bacteria and bathymodioline mussels at hydrothermal vent and cold seep sites”. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Luciana Raggi (2007) “Molecular studies of two different bacterial symbioses in invertebrates: diversity and biogeography”. International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Jillian Petersen-Struck (2006) "Molecular studies of deep-sea invertebrate symbioses: characterisation, geobiological coupling, and biogeography". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Nancy Brewig (2006) "Molecular biological characterization of the symbionts from the gutless marine oligochaete Inanidrilus exumae". University of Hamburg.
  • Amelia Rotaru (2005) "Genomic analysis of the endosymbiotic communities of a gutless marine worm (Olavius algarvensis)". International Max Planck Research School for Marine Microbiology, University of Bremen.
  • Mirjam Perner (2003) "Biogechemical and microbiological characterisation of marine sediments in Elba - a contribution to an ecosystematic analysis of oligochaetes with bacterial symbionts". University of Hamburg.
  • Christina Zaluski (2003) "Molecular biological characterisation of bacterial symbionts in the marine gutless oligochaete Inandrilus leukodermatus". University of Hamburg.
  • Claudia Bergin (2002) "Characterisation of stabile carbon isotopes in tissues and RNA of mussels with endosymbiotic bacteria". University of Bremen.
  • Anna Blazejak (2001) "Molecular characterisation of bacteria associated with marine oligochaetes (Annelida)". Technical University Berlin.
  • Steffen Kolb (1999) "Abundances and vertical distribution of sulfate-reducing and chemolithotrophic sulfur-oxdizing bacteria in sandy Wadden Sea sediments". University of Bremen.
  • Caroline Rühland (1999) "Molecular characterization of bacteria associated with marine oligochaetes (Annelida)". University of Hamburg.
  • Arnd Prilip (1999) "Characterisation of ectosymbionts of marine nematodes from the genus Leptonemella and free-living sulfur-oxidizing bacteria with microbiological and molecular methods". University of Bremen.
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