Pu­bli­ka­tio­nen 2012

Alon­so C., Musat N., Adam B., Kuy­pers M., and Amann R. (2012). HISH-SIMS ana­ly­sis of bac­te­ri­al uptake of al­gal-de­ri­ved car­bon in the Rio de la Pla­ta es­tua­ry. Syst. Appl. Microbiol. 35:541-548. [PMID:23026312]
Ar­nos­ti C., Fuchs B.M., Amann R., and Pas­sow U. (2012). Con­tras­ting ex­tra­cel­lu­lar en­zy­me ac­tivi­ties of par­ti­cle-as­so­cia­ted bac­te­ria from dis­tinct pro­vin­ces of the North At­lan­tic Oce­an. Front. Aquat. Microbiol. 425:1-9. [fam page]
Beut­ler M., Mi­lucka J., Hinck S., Schrei­ber F., Brock J., Mußmann M., Schulz-Vogt H.N., and de Beer D. (2012). Va­cuo­lar re­spi­ra­ti­on of ni­tra­te cou­p­led to en­er­gy con­ser­va­ti­on in fil­amen­tous Beggiatoaceae. Environ. Microbiol. 14:2911–2919. [PMID:22925165]
Bul­ga­rel­li D., Rott M., Schla­ep­pi K., van The­maat E.V.L., Ah­ma­di­ne­jad N., As­sen­za F., Rauf P., Hu­et­tel B., Rein­hardt R., Schmel­zer E., Pe­plies J., Gloeck­ner F.O., Amann R., Eick­horst T., and Schul­ze-Le­fert P. (2012). Re­vea­ling struc­tu­re and as­sem­bly cues for Arabidopsis root-in­ha­b­it­ing bac­te­ri­al mi­cro­bio­ta. Nature 488:91-95. [PMID:22859207]
Fer­rer M., Wer­ner J., Cher­ni­ko­va T.N., Bar­gie­la R., Fernán­dez L., La Cono V., Wald­mann J., Teeling H., Go­ly­shi­na O.V., Glöck­ner F.O., Ya­ki­mov M.M., Go­ly­shin P.N., the MAM­BA Sci­en­ti­fic Con­sor­ti­um. (2012). Un­vei­ling mi­cro­bi­al life in the new deep-sea hy­per­sa­li­ne Lake The­tis. Part II: a me­ta­ge­no­mic stu­dy. Environ. Mircobiol. 14:268-28. [PMID:22040283]
Gro­te J., Bruck­ner C.G., Glöck­ner F.O., Jost G., Teeling H., La­b­renz M., Jür­gens K. (2012). Ge­no­me and phy­sio­lo­gy of a mo­del Ep­si­lon­pro­te­ob­ac­te­ri­um re­s­pon­si­ble for sul­fi­de de­to­xi­fi­ca­ti­on in ma­ri­ne oxy­gen de­p­le­ti­on zo­nes. Proc. Natl. Acad. Sci. 109:506-510. [PMID:22203982]
Gómez-Pereira P.R., Schü­ler M., Fuchs B.M., Bennke C., Teeling H., Wald­mann J., Rich­ter M., Bar­be V., Ba­tail­le E., Glöck­ner F.O., Amann R. (2012). Ge­no­mic con­tent of un­cul­tu­red Bacteroidetes from con­tras­ting ocea­nic pro­vin­ces in the North At­lan­tic Oce­an. Environ. Microbiol. 14:52-66. [PMID:21895912]
Go­ly­shin P.N., Leg­ge­wie C., Ja­e­ger, K.E., Teeling H., Glöck­ner F.O. (2012) Bi­o­tech­no­lo­gie aus dem Mit­tel­meer. La­bor­welt 13:18-19.
Hill P.G., Heywood J.L., Hol­land R.J., Pur­die D.A., Fuchs B.M., and Zubkov M.V. (2012). In­ter­nal and ex­ter­nal in­flu­en­ces on near-sur­face mi­cro­bi­al com­mu­ni­ty struc­tu­re in the vicini­ty of the Cape Ver­de Is­lands. Microbial Ecology 63:139-148. [PMID:21994033]
Kel­ler­mann M.Y., We­ge­ner G., El­vert M., Yo­shi­na­ga M.Y., Lin Y.-S., Hol­ler T., Mol­lar X.P., Knittel K., Hin­richs K.-U. (2012). Au­to­tro­phy as a pre­do­mi­nant mode of car­bon fixa­ti­on in an­ae­ro­bic me­tha­ne-oxi­di­zing mi­cro­bi­al com­mu­nities. PNAS 109:19321-19326. [PMID:23129626]
Klei­ner M., Wen­trup C., Lott C., Teeling H., Wet­zel S., Young J., Chang Y.J., Shah M., Ver­Berk­moes N.C., Zar­zy­cki J., Fuchs G., Mar­kert S., Hem­pel K., Voigt B., Be­cher D., Lie­be­ke M., Lalk M., Al­brecht D., He­cker M., Schwe­der T., Du­bi­lier N. (2012) Meta­pro­teo­m­ics of a gut­less mar­ine worm and its sym­bi­otic mi­cro­bial com­mu­ni­ty re­veal un­usu­al path­ways for car­bon and en­ergy use. PNAS 109:E1173-82. [PMID: 22517752]
Kleindienst S., Ra­met­te A., Amann R., Knittel K. (2012). Dis­tri­bu­ti­on and in situ ab­un­dance of sul­fa­te-re­du­cing bac­te­ria in di­ver­se ma­ri­ne hy­dro­c­ar­bon seep se­di­ments. Environ. Microbiol. 14:2689-2710. [PMID:22882476]
Ko­ji­ma H., Tsuts­u­mi M., Is­hi­ka­wa K., Iwa­ta T., Mußmann M., and Fu­kui M. (2012). Dis­tri­bu­ti­on of pu­ta­ti­ve de­ni­tri­fy­ing me­tha­ne oxi­di­zing bac­te­ria in se­di­ment of a freshwa­ter lake, Lake Biwa. Syst. Appl. Microbiol. 35:233-238. [PMID:22504019]
Kubo K., Lloyd K.G., Bidd­le J., Amann R., Tes­ke A., and Knittel K. (2012). Ar­chaea of the Mis­cel­laneous Cren­ar­chaeo­tal Group are ab­un­dant, di­ver­se, and wi­de­s­pre­ad in ma­ri­ne se­di­ments. ISME J. 6:1949-1965. [PMID:22551871]
Lenk S., Moraru C., Hahn­ke S., Arnds J., Rich­ter M., Kube M., Rein­hardt R., Brink­hoff T., Har­der J., Amann R., and Mußmann M. (2012). Ro­se­ob­ac­ter cla­de bac­te­ria are ab­un­dant in co­as­tal se­di­ments and en­code a no­vel com­bi­na­ti­on of sul­fur oxi­da­ti­on ge­nes. ISME J. 6:2178-87. [PMID:22739490]
Morau C., and Amann R. (2012). Crys­tal ball: fluo­re­scence in situ hy­bri­di­za­t­i­on in the age of su­per-re­so­lu­ti­on mi­cro­sco­py. Syst. Appl. Microbiol. 35:549-552. [PMID:23140662]
Ober­beck­mann S., Fuchs B.M., Meiners M., Wi­chels A., Wiltshire K.H., and Gerdts G. (2012). Sea­so­nal dy­na­mics and mo­de­ling of a Vi­brio com­mu­ni­ty in co­as­tal wa­ters of the North Sea. Microb. Ecol. 63:543-55. [PMID:22202887]
Pe­ter­sen J.M., Wen­trup C., Ver­na C., Knittel K., and Du­bi­lier N. (2012). Orig­ins and evo­lu­tio­na­ry fle­xi­bi­li­ty of che­mo­syn­the­tic sym­bi­onts from deep-sea ani­mals. Biological Bulletin 223:123-137. [PMID:22983038]
Piz­zet­ti I., Fazi S., Fuchs B.M., and Amann R. (2012). High ab­un­dance of no­vel en­vi­ron­men­tal chla­my­diae in a Tyr­rhe­ni­an co­as­tal lake (Lago di Pao­la, Ita­ly). Environ. Microbiol. Rep. 4:446-452. [PMID:23760831]
Sal­man V., Amann R., Shub D.A., and Schulz-Vogt H.N. (2012). Mul­ti­ple self-spli­cing in­trons in the 16S rRNA ge­nes of gi­ant sul­fur bac­te­ria. Proc. Natl. Acad. Sci. 109:4203-4208. [PMID:22371583]
Sán­chez-An­drea I., Knittel K., Amann R., Amils R., Sanz J. (2012). Quan­ti­fi­ca­ti­on of Tin­to Ri­ver se­di­ment mi­cro­bi­al com­mu­nities: the im­port­an­ce of sul­fa­te-re­du­cing bac­te­ria and their role in at­te­nua­ting acid mine drai­na­ge. Appl. Environ. Microbiol. 78:4638-4645. [PMID:22544246]
Schmitt H., Eick­horst T., and Mußmann M. (2012). Gold-FISH: A new ap­proach for the in situ de­tec­tion of pro­ka­ryo­tes com­bi­ning fluo­re­scence and scan­ning elec­tron mi­cro­sco­py. Syst. Appl. Microbiol. 35:518-525. [PMID:22770611]
Teeling H., Fuchs B.M., Be­cher D., Klockow C., Gar­de­brecht A., Bennke C.M., Kassabgy M., Huang S., Mann A.J., Wald­mann J., We­ber M., Klind­worth A., Otto A., Lan­ge L., Bern­hardt J., Reinsch C., He­cker M., Pe­plies J., Bo­ckel­mann F.D., Cal­lies U., Gerdts G., Wi­chels A., Wiltshire K.H., Glöck­ner F.O., Schwe­der T., and Amann R. (2012). Sub­stra­te-con­trol­led suc­ces­si­on of ma­ri­ne bac­te­rio­plank­ton po­pu­la­ti­ons in­du­ced by a phy­to­plank­ton bloom. Science 336:608-611. [PMID:22556258]
Teeling H., Glöck­ner F.O. (2012) Cur­rent op­por­tun­it­ies and chal­len­ges in mi­cro­bial meta­gen­ome ana­ly­sis--a bio­in­form­atic per­spect­ive. Brief. Bio­in­form. [DOI:10.1093/bib/bbs039]
Thiele S., Fuchs B.M., Ra­maiah N., and Amann R. (2012). Mi­cro­bi­al com­mu­ni­ty re­s­pon­se du­ring the iron fer­ti­liza­t­i­on ex­pe­ri­ment LO­HAFEX. Appl. Environ. Microbiol. 78:8803-8812. [PMID:23064339]
Voigt B., Hieu C.X., Hem­pel K., Be­cher D., Schlü­ter R., Teeling H., Glöck­ner F.O., Amann R., He­cker M., Schwe­der T. (2012) Cell sur­face pro­teo­me of the mar­ine planc­to­my­cete Rho­do­pi­rel­lu­la balt­ica. Proteomics 12: 1781-91. [PMID:22623273]

 

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