Publications 1993

Department of Biogeochemistry

Canfield, D.E., B.B. Jørgensen, H. Fossing, R. Glud, J. Gundersen, N.B. Ramsing, B. Thamdrup, J. W. Hansen, L.P. Nielsen and P.O.J. Hall: Pathways of organic carbon oxidation in three continental margin sediments. Mar. Geol. 113:27- 40 (1993). ScienceDirect

Canfield, D.E., B. Thamdrup and J.W. Hansen: The anaerobic degradation of organic matter in Danish coastal sediments: Iron reduction, manganese reduction, and sulfate reduction. Geochim. Cosmochim. Acta 57:3867- 3883 (1993). ScienceDirect

Iversen, N. and B.B. Jørgensen: Diffusion coefficients of sulfate and methane in marine sediments: Influence of porosity. Geochim. Cosmochim. Acta 57:571-578 (1993). ScienceDirect

Jensen, H.S. and B. Thamdrup: Iron-bound phosphorus in marine sediments as measured by bicarbonate-dithionite extraction. Hydrobiologia 253:47-59 (1993). Springer

Luther, G.W. III and T.G. Ferdelman: Voltammetric characterization of Iron (II) Sulfide Complexes in Laboratory Solutions and in Marine Waters and Porewaters. Environ. Sci. Technol. 27:1154 -1163 (1993). ACS

Thamdrup, B., K. Finster, J.W. Hansen and F. Bak: Bacterial disproportionation of elemental sulfur coupled to chemical reduction of iron or manganese. Appl. Environ. Microbiol. 59(1):101-108 (1993). NCBI Full Text

Microsensor Group

Bebout, B.M., M.W. Fitzpatrick and H.W. Paerl: Identification of the sources of energy for nitrogen fixation and physiological characterization of nitrogen-fixing members of a marine microbial mat community. Appl. Environ. Microbiol. 59:1495-1503 (1993). PubMed FullText

Berninger, U.-G., S.A. Wickham and B.J. Finlay: Trophic coupling within the microbial food web: a study with fine temporal resolution in a eutrophic freshwater ecosystem. Freshwater Biol. 30: 419-432 (1993). Wiley

Garcia-Pichel, F. and R.W. Castenholz: Occurrence of UV-absorbing mycosporine-like compounds among cyanobacterial isolates and an estimate of their screening capacity. Appl. Environ. Microbiol. 59(1):163-169 (1993). Pub Med Full Text

Garcia-Pichel, F., C.E. Wingard and R.W. Castenholz: Evidence regarding the UV sunscreen role of a Mycosporine-like compound in the cyanobacterium Gloeocapsa sp. Appl. Environ. Microbiol. 59(1):170-176 (1993). Pub Med Full Text

Glud, R.N., J.K. Gundersen, N.P. Revsbech and B.B. Jørgensen: In situ measurements of total and diffusive oxygen uptake of sediments. In: Trends in Microbial Ecology. pp. 427-430, Proc. 6th ISME, R. Guerrero & C. PedrÃ³s- AliÃ³ (eds.), Spanish Soc. Microbiol., Barcelona (1993).

Kühl, M.: Photosynthesis, 02 respiration and sulfur cycling in a cyanobacterial biofilm. In: Trends in Microbial Ecology, Proc. 6th ISME, Eds. R. Guerrero, C. PedrÃ³s- AliÃ³, Spanish Soc. Microbiol., Barcelona 1993:163-167.

Paerl, H.W., B.M. Bebout, S.B. Joye and D.J. Des Marais: Microscale characterization of dissolved organic matter production and uptake in marine microbial mat communities. Limnol. and Oceanogr. 38(6):1150-1161 (1993). Pub Med Full Text

Paerl, H.W., L.E. Prufert-Bebout and C. Guo: Iron-stimulated N2 fixation and growth in natural and cultured populations of the planktonic marine cyanobacteria Trichodesmium spp. Appl. Environ. Microbiol. 60(3):1044-1047 (1993). ASM Full Text

Ploug, H., C. Lassen and B.B. Jørgensen: Action spectra of microalgal photosynthesis and depth distribution of spectral scalar irradiance in a coastal marine sediment of Limfjorden, Denmark. FEMS Mircobiol. Ecol. 102:261-270 (1993).Wiley

Proteau, P.J., W.H. Gerwick, F. Garcia-Pichel and R. Castenholz: The structure of scytonemin, an ultraviolet sunscreen pigment from the sheaths of cyanobacteria. Experientia 49:825-820 (1993). PubMed

Prufert-Bebout, L.E., H.W. Paerl and C. Lassen: Growth, nitrogen fixation and spectral attenuation in cultivated Trichodesmium species. Appl. Environ. Microbiol. 59(5):1367-1375 (1993). Pub Med Full Text

Rasmussen, K.A., I.G. Macintyre and L.E. Prufert: Modern stromatolite reefs fringing a brackish coastline, Chetumal Bay, Belize. Geology 21:199-202 (1993). Geology

Wickham, S.A., J.F. Gilbert and U.-G. Berninger: Effects of rotifers and ciliates on the growth and survival of Daphnia. Journal Plankt. Res. 15(3):317-334 (1993). JPR

Molecular Ecology Group

Corstjens, P. and G. Muyzer: Phylogenetic Analysis of the Metal-Oxidizing Bacteria Leptothrix discophora and Sphaerotilus natans using 16S rDNA Sequencing Data System. Appl. Microbiol. 16:219-223 (1993). Full Text

Muyzer, G., E.C. De Waal and A.G. Uitterlinden: Profiling of Complex Microbial Populations by Denaturing Gradient Gel Electrophoresis Analysis of Polymerase Chain Reaction-Amplified Genes Coding for 16S rRNA. Appl. and Environ. Microbiol. 59(3):695-700 (1993). PubMed Full Text

Muyzer, G., N. B. Ramsing and R. Lillebœk: Molecular probes for monitoring microorganisms in the environment. Protocolls in Molecular Ecology, Leiden 1:1-16 (1993).

Ramsing, N.B., M. Kühl and B.B. Jørgensen: Distribution Of sulfate-reducing bacteria, 0₂, and H₂S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes. Appl. Environ. Microbiol. 59(11):3840-3849 (1993). PubMed Full Text

Ramsing, N.B., M. Kühl and B.B. Jørgensen: Identification of sulfate-reducing bacteria using 16S rRNA binding oligonucleotide probes. In: Trends in Microbial Ecology. pp. 521-526, Proc. 6th ISME, R.Guerrero & C. Pedrós- Alió (eds.), Spanish Soc. Microbiol., Barcelona (1993). Springer

Department of Microbiology

Harder, J.: Ribonucleotide reductases and their occurrence in microorganisms: a link to the RNA/DNA transition. FEMS Microbiol. Rev. 12:273-292 (1993). PubMed

Rabus, R., R. Nordhaus, W. Ludwig and F. Widdel: Complete oxidation of toluene under strictly anoxic conditions by a new sulfate-reducing bacterium. Appl. Environ. Microbiol. 59(5):1444-1451 (1993). PubMed Full Text

Sun, X., J. Harder, M. Krook, H. Jörnvall, B. -M. Sjöberg and P.Reichard: A possible glycine radical in anaerobic ribonucleotide reductase from Escherichia coli: nucleotide sequence of the cloned nrdD gene. Proc. Natl. Acad. Sci. USA 90:577-581 (1993). PubMed Full Text

Widdel, F.: Metabolic capacities of sulfate-reducing bacteria under various environmental conditions. In: Trends in Microbial Ecology, Proc. 6th ISME, Eds. R.Guerrero, C. Pedrós-Alió. Spanish Soc. Microbiol., Barcelona 1993, 87‐91.

Widdel, F., S. Schnell, S. Heising, A. Ehrenreich, B. Assmus and B. Schink: Ferrous iron oxidation by anoxygenic phototrophic bacteria. Nature 362:834‐835 (1993). Nature