Publications 1994

Department of Biogeochemistry

Boudreau, B.P.: Is burial velocity a master parameter for bioturbation? Geochim. Cosmochim. Acta 58(4):1243-1249 (1994). ScienceDirect

Boudreau, B.P and R.L. Marinelli: A modelling study of discontinuous biological irrigation. J. Marine Research 52:947-968 (1994). ResearchGate Full Text

Canfield, D.E.: Factors influencing organic carbon preservation in marine sediments. Chem. Geology 114:315-239 (1994). PubMed

Canfield, D.E. and D.J. des Marais: Cycling of carbon, sulfur, oxygen and nutrients in a microbial mat. In: Microbial Mats: Structure, Development and Environmental Significance. pp.255-263, NATO-ASI Ser., L.J. Stal & P.Caumette(eds.), Springer, New York (1994). Springer

Canfield, D.E. and B. Thamdrup: The production of ³⁴S-depleted sulfide during bacterial disproportionation of elemental sulfur. Science 266, 1973-1975 (1994). PubMed

Church, T.M., N. Hussain, T.G. Ferdelman and S.W. Fowler: An efficient quantitative technique for the simultaneous analyses of radon daughters ²¹⁰Pb, ²¹⁰Bi and ²¹⁰Po. Talanta 41(2):243-249 (1994). PubMed

Des Marais, D.J. and D.E. Canfield: The carbon isotope biogeochemistry of microbial mats. In: Microbial Mats: Structure, Development and Environmental Significance. pp.289-298 , NATO-ASI Ser., Vol. G 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Elsgaard, L., M.F. Isaksen, B.B. Jørgensen, A.-M. Alayse and H.W. Jannasch: Microbial sulfate reduction in deep-sea sediments at the Guaymas Basinhydrothermal vent area: Influence of temperature and substrates. Geochim. Cosmochim. Acta 58(16):3335-3343 (1994). NASA

Elsgaard, L, D. Prieur, G.M. Mukawaya and B.B. Jørgensen: Thermophilic sulfate reduction in hydrothermal sediment of Lake Tanganyika, East Africa. Appl. Environ. Microbiol. 60(5):1473-1480 (1994). ASM Full Text

Hansen, J.W., B. Thamdrup, H. Fossing and B.B. Jørgensen: The redox balance and temperature dependency of mineralization in Aarhus Bay sediment (in Danish). Havforskning fra Miljøstyrelsen 36:0-71 (1994).

Isaksen, M.F., F. Bak and B.B. Jørgensen: Thermophilic sulfate-reducing bacteria in cold marine sediment. FEMS Microbiol. Ecol. 14:1-8 (1994). Wiley

Jørgensen, B.B.: Diffusion processes and boundary layers in microbial mats. In: Microbial mats: Structure, development and environmental significance. pp.243-253, NATO ASI Ser. G., L.J. Stal& P. Caumette (eds.), Springer, Berlin (1994). Springer

Jørgensen, B.B: Die Mikrowelt der Meeresbakterien. MPG Jahrbuch 1994:25-42. Springer

Jørgensen, B.B: Sulfate reduction and thiosulfate transformations in a cyanobacterial mat during a diel oxygen cycle. FEMS Microbiology Ecology 13:303-312 (1994). Wiley

Linke, P., E. Suess, M. Torres, V. Martens , W.D. Rugh, W. Ziebis and L.D. Kulm: In situ measurements of fluid flow from cold seeps at active continental margins. Deep-Sea Res. 41(4):721-739 (1994). ScienceDirect

Moeslund, L., B. Thamdrup and B.B. Jørgensen: Sulfur and iron cycling in a coastal sediment: Radiotracer studies and seasonal dynamics. Biogeochem. 27:129-152 (1994). Springer

Raiswell, R., D.E. Canfield and R.A. Bremer: A comparison of iron extraction methods for the determination of degree of pyritisation and the recognition of iron-limited pyrite formation. Chem. Geol. 111:101-110 (1994). PubMed

Thamdrup, B., K. Finster, H. Fossing, J.W. Hansen and B.B. Jørgensen: Thiosulfate and sulfite distributions in pore water of marine sediments related to manganese, iron, and sulfur geochemistry. Geochim. Cosmochim. Acta 58:67-73 (1994). ScienceDirect

Thamdrup, B., H. Fossing and B.B. Jørgensen: Manganese, iron and sulfur cycling in a coastal marine sediment, Aarhus bay, Denmark. Geochim. Cosmochim. Acta 58: 5115-5129 (1994). ScienceDirect

Thamdrup, B., R.N. Glud and J.W. Hansen: Manganese oxidation and in situ manganese fluxes from a coastal sediment. Geochim. Cosmochim. Acta 58(11):2563-2570 (1994). ScienceDirect

Microsensor Group

Bebout, B.M., H.W. Paerl, J.E. Bauer, D.E. Canfield and D.J. Des Marais: Nitrogen cycling in microbial mat communities: the quantitative importance of N-fixation and other sources of N for primary productivity. In: Microbial Mats: Structure, Development and Environmental Significance. pp.265-271, Vol. G 35, Nato ASI Ser. V.G. 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Garcia-Pichel, F. : A model for internal self-shading in planktonic organisms and its implication for the usefulness of ultraviolet sunscreens. Limnol. Oceanogr. 39(7):1704-1717 (1994). Full Text

Garcia-Pichel, F. and R.W. Castenholz: On the significance of solar ultraviolet radiation for the ecology of microbial mats. In: Microbial Mats: Structure, Development and Environmental Significance. pp. 77-83, Nato ASI Ser. V.G. 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Glazer, A.N., C. Chan, U. Karsten and J.A. West: Salinity tolerance, biliproteins, and floridoside content of Compsopogon coeruleus (Rhodophyta). J. Phycol. 30:457-461 (1994). Wiley Full Text

Glud, R.N., J.K. Gundersen, B.B. Jørgensen, N.P. Revsbech and H.D. Schulz: Diffusive and total oxygen uptake of deep-sea sediments in the eastern South Atlantic Ocean: in situ and laboratory measurements. Deep-Sea Res. I 41(11/12):1767-1788 (1994). ScienceDirect

Glud, R.N., J.K. Gundersen, N.P. Revsbech and B.B. Jørgensen: Effects on the benthic diffusive boundary layer imposed by microelectrodes. Limnol. Oceanogr. 39(2):462-467 (1994). Full Text

Karsten, U., K.D. Barrow, A.S. Mostaert, R.J. King and J.A. West: 13C- and 1H-NMR studies on digeneaside in the red alga Caloglossa leprieurii - a re-evaluation of its osmotic significance. Plant Physiol. and Biochem. 32:669-676 (1994).

Karsten, U., S. Koch, J.A. West and G.O. Kirst: The intertidal red alga Bostrychia Simpliciuscula Harvey ex J. Agardh from a mangrove swamp in Singapore: acclimation to light and salinity. Aquatic Bot. 48:313-323 (1994). ScienceDirect

Karsten, U., K. Kück, C. Daniel, C. Wiencke and G.O. Kirst: A method for complete determination of dimethylsulfoniopropionate (DMSP) in marine macroalgae from different geographical regions. Phycologia 33(3):171-176 (1994). Phycologia

Karsten, U., J.A. West, G. Zuccarello and G.O. Kirst: Physiological ecotypes in the marine alga Bostrychia radicans (Ceramiales, Rhodophyta) from the east coast of the USA. J. Phycol. 30:174-182 (1994). Wiley

Klimant, P. Belser and O.S. Wolfbeis: Novel metal-organic ruthenium(II) diimin complexes for use as longwave excitable luminescent oxygen probes. Talanta 41(6):985-991 (1994). PubMed

Kühl, M. and B.B. Jørgensen: The light field of microbenthic communities: Radiance distribution and microscale optics of sandy coastal sediments. Limnol. Oceanogr. 39:1368-1398 (1994). ResearchGate Full Text

Kühl, M., C. Lassen and B.B. Jørgensen: Optical properties of microbial mats: Light measurements with fiber-optic microprobes. In: Microbial mats: Structure, Development and Environmental Significance. pp. 149-166, NATO ASI Ser. G., L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Lassen, C. and B.B. Jørgensen: A fiber-optic irradiance microsensor (cosine collector): application for in situ measurements of absorption coefficients in sediments and microbial mats. FEMS Microbiol. Ecol. 15:321-336 (1994). Wiley

Lassen, C., H. Ploug, M. Kühl, B.B. Jørgensen and N.P. Revsbech: Oxygenic photosynthesis and light distribution in marine microbial mats. In: Microbial mats: Structure, Development and Environmental Significance. pp.305-310, NATO ASI Ser., Vol. G 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Lassen, C., L.E. Bebout, H.W. Paerl and B.B. Jørgensen: Microsensor studies of oxygen and light distribution in the green macroalga Codium fragile. J. Phycol. 30:381-386 (1994). Wiley

Oehme, I., B. Prokes, I. Murcovic, T. Werner, I. Klimant and O.S. Wolfbeis: LED-compatible copper(II)-selective optrode membrane based on lipophilized zincon. Fresenius J. Anal. Chem. 350:563-567 (1994). Springer

Paerl, H.W., B.M. Bebout, C.A. Currin, M.W. Fitzpatrick and J.L. Pinckney: Nitrogen fixation dynamics in microbial mats. In: Microbial Mats: Structure, Development and Environmental Significance. pp.323-337, Vol G 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Preininger, C., I. Klimant and O.S. Wolfbeis: Optical fiber sensor for biological oxygen demand. Anal. Chem. 66(11):1841-1846 (1994). ACS

Prufert-Bebout, L. and Y. Cohen: Panel discussion.: New methods in microbial mat research. In: Microbial mats: Structure, Development and Environmental Significance. pp.235-240, NATO/ASI Ser., Vol. G 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Prufert-Bebout, L. and F. Garcia-Pichel: Field and cultivated Microcoleus chthonoplastes: The search for clues to its prevalence in marine microbial mats. In: Microbial Mats: Structure, Development and Environmental Significance. pp.111-116, Nato ASI Ser., Vol. G 35, L.J. Stal & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Stal, L.J., H.W. Paerl, B.M. Bebout and M. Villbrandt: Heterocystous versus non-heterocystous cyanobacteria in microbial mats. In: Microbial Mats: Structure, Development and Environmental Significance. pp.403-414, Vol. G 35, L.J. Stal. & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Weigl, B., A. Holobar, W. Trettnak, I. Klimant, H. Kraus, P. O´Leary and O.S. Wolfbeis: Optical triple sensor for measuring pH, oxygen and carbon dioxide. J. Biotechn. 32:127-138 (1994). PubMed

West, J.A., G.C. Zuccarello, F.P. Pedroche and U. Karsten: Caloglossa Apomeiotica sp. nov. (Ceramiales, Rhodophyta) from Pacific México. Bot. Marina 37:381-390 (1994). DE Gruyter

Department of Microbiology

Champion, K. M., R.J. Cook, S.L. Tollaksen and C.S. Giometti: Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc. Natl. Acad. Sci. USA 91:11338-11342 (1994). PubMed Full Text

Ehrenreich, A. and F. Widdel: Anaerobic oxidation of ferrous iron by purple bacteria, a new type of phototrophic metabolism. Appl. Environ. Microbiol. 60(12):4517-4526 (1994). PubMed Full Text

Ehrenreich, A. and F. Widdel: Phototrophic oxidation of ferrous minerals - a new aspect in the redox microbiology of iron. In: Microbial Mats: Structure, Development and Environmental Significance. pp.393-402, NATO ASI Ser., Vol. G 35, L.J. Stal. & P. Caumette (eds.), Springer, Heidelberg (1994). Springer

Rueter, P., R. Rabus, H. Wilkes, F. Aeckersberg, F.A. Rainey, H.W. Jannsch and F. Widdel: Anaerobic oxidation of hydrocarbons in crude oil by new types of sulphate-reducing bacteria. Nature 372:455-458 (1994). PubMed

Ph.D. theses

Aeckersberg, F.: Anaerober Abbau von Alkanen und 1-Alkenen durch sulfatreduzierende Bakterien. Diss. Univ. Bremen, Bremen (1994).

Ehrenreich, A.: Die anaerobe Oxidation von Fe(II) durch Purpurbakterien: Eine neue Form der bakteriellen Photosynthese und ihre Bedeutung für den Redoxzyklus des Eisens im Archaikum. Aachen, Mainz, 1995, zugleich: Diss. Univ. Bremen, Bremen (1994), 156pp.

Molecular Ecology Group

Muyzer, G. and E.C. de Waal: Determination of the genetic diversity of microbial communities using DGGE analysis of PCR-amplified 16S rDNA, In: Microbial mats: Structure, Development and Environmental Significance. pp.207-214, NATO ASI Ser., Vol. G 35, Eds. L.J. Stal & P. Caumette, Springer, Heidelberg (1994). Springer

Ramsing, N.B And L. Prufert-Bebout: Motility of Microcoleus chthonoplastes subjected to different light intensities quantified by digital image analysis. In: Microbial mats: Structure, Development and Environmental Significance. pp. 183-191, NATO ASI Ser., L.J. Stal. & P. Caumette (eds.), Springer, Heidelberg; (1994). Springer

Teske, A.P., E. Alm, J.M. Regan, S. Toze, B.E. Rittmann and D.A. Stahl: Evolutionary Relationships among Ammonia- and Nitrite-Oxidizing Bacteria. J. Bacteriol. 176(21):6623-6630 (1994). PubMed Full Text