Publications 2021

Zeugner, L.E., K. Krüger, J. Barrero-Canosa, R.I. Amann, and B.M. Fuchs. (2021). In situ visualization of glycoside hydrolase family 92 genes in marine ﬂavobacteria. ISME Commun. 1:81. (doi:10.1038/s43705-021-00082-4)

Francis, B., T. Urich, A. Mikolasch, H. Teeling, and R. Amann. (2021). North Sea spring bloom-associated Gammaproteobacteria fill diverse heterotrophic niches. Env. Microbiome 16:15. (doi:10.1186/s40793-021-00385-y)

Brunet, M., N. Le Duff, B.M. Fuchs, R. Amann, T. Barbeyron, F. Thomas. (2021). Specific detection and quantification of the marine flavobacterial genus Zobellia on macroalgae using novel qPCR and CARD-FISH assays. Syst. Appl. Microbiol. 44:126269. (doi:10.1016/j.syapm.2021.126269)

Alejandre-Colomo, C., B. Francis, T. Viver, J. Harder, B.M. Fuchs, R. Rossello-Mora, and R. Amann. (2021). Cultivable Winogradskyella species are genomically distinct from the sympatric abundant candidate species. ISME Commun. 1:51. (doi:10.1038/s43705-021-00052-w)

Heins, A., R.I. Amann, J. Harder. (2021). Cultivation of particle-associated heterotrophic bacteria during a spring phytoplankton bloom in the North Sea. Syst. Appl. Microbiol. 44:126232. (doi:10.1016/j.syapm.2021.126232)

Miksch, S., M. Meiners, A. Meyerdierks, D. Probandt, G. Wegener, J. Titschack, M.A. Jensen, A. Ellrott, R. Amann and K. Knittel. (2021). Bacterial communities in temperate and polar coastal sands are seasonally stable. ISME Commun. 1:29. (doi:10.1038/s43705-021-00028-w)

Ludwig, W., T. Viver, R. Westram, J.F. Gago, E. Bustos-Caparros, K. Knittel, R. Amann, R. Rossello-Mora. (2021). Release LTP_12_2020, featuring a new ARB alignment and improved 16S rRNA tree for prokaryotic type strains. Syst. Appl. Microbiol. 44:126218. (doi:10.1016/j.syapm.2021.126218)

Heins, A., G. Reintjes, R.I. Amann, J. Harder. (2021). Particle Collection in Imhoff Sedimentation Cones Enriches Both Motile Chemotactic and Particle-Attached Bacteria. Front. Microbiol. 12:643730. (doi:10.3389/fmicb.2021.643730)

Viver, T., R.E. Conrad, L.H. Orellana, M. Urdiain, J.E. González-Pastor, J.K. Hatt, R. Amann, J. Anton, K.T. Konstantinidis, R. Rosselló-Móra. (2021). Distinct ecotypes within a natural haloarchaeal population enable adaptation to changing environmental conditions without causing population sweeps. ISME J. 15:1178-91. (doi:10.1038/s41396-020-00842-5)

Priest, T., L.H. Orellana, B. Huettel, B.M. Fuchs, R. Amann. (2021). Microbial metagenome-assembled genomes of the Fram Strait from short and long read sequencing platforms. PeerJ 9:e11721. (doi:10.7717/peerj.11721)

Arnosti, C., M. Wietz, T. Brinkhoff, J.H. Hehemann, D. Probandt, L. Zeugner, and R. Amann. (2021). The Biogeochemistry of Marine Polysaccharides: Sources, Inventories, and Bacterial Drivers of the Carbohydrate Cycle. Ann. Rev. Mar. Sci. 13:81-108. (doi:10.1146/annurev-marine-032020-012810)

Amann, R.I., and F. Aspetsberger. (2021). Süßes Festmahl mit mehreren Gängen: wie Bakterien Algen vernaschen. BiuZ 51:66-73. (doi:10.11576/biuz-4104)

Francis, T.B., D. Bartosik, T. Sura, A. Sichert, J.H. Hehemann, S. Markert, T. Schweder, B.M. Fuchs, H. Teeling, R.I. Amann, and D. Becher. (2021). Changing expression patterns of TonB-dependent transporters suggest shifts in polysaccharide consumption over the course of a spring phytoplankton bloom. ISME J. 15:2336-50. (doi:10.1038/s41396-021-00928-8)

Gründger, F., D. Probandt, K. Knittel, V. Carrier, D. Kalenitchenko, A. Silyakova, P. Serov, B. Ferré, M. Svenning, H. Niemann. (2021). Seasonal shifts of microbial methane oxidation in Arctic shelf waters above gas seeps (Svalbard archipelago). Limnol. Oceanogr. (doi.org/10.1002/lno.11731).

Klassen, L., G. Reintjes, J.P. Tingley, D.R. Jones, J.H. Hehemann, A.D. Smith, T.D. Schwinghamer, C. Arnosti, L. Jin, T.W. Alexander, D. Thomas, R.I. Amann, T.A. McAllister, and D.W. Abbott. (2021). Quantifying fluorescent glycan uptake to elucidate strain-level variability in foraging behaviors of rumen bacteria. Microbiome 9:23. (doi:10.1186/s40168-020-00975-x)

Priest, T., B. Fuchs, R. Amann, and M. Reich. (2021). Diversity and biomass dynamics of unicellular marine fungi during a spring phytoplankton bloom. Environ. Microbiol. 23:448-463. (doi:10.1111/1462-2920.15331)

Vaksmaa, A., K. Knittel, A. Abdala, M. Goudriaan, A. Ellrott, H. Witte, I. Vollmer, F. Meirer, C. Lott, M. Weber, H. Niemann. Microbial communities on plastic polymers in the Mediterranean Sea. Front. Microbiol. 12:673553. (doi:10.3389/fmicb.2021.673553)

Vidal-Melgosa, S., A. Sichert, T.B. Francis, D. Bartosik, J. Niggemann, A. Wichels, W.G.T. Willats, B.M. Fuchs, H. Teeling, D. Becher, T. Schweder, R.I. Amann, and J.H. Hehemann. (2021). Diatom fucan polysaccharide precipitates carbon during algal blooms. Nature Commun. 12:1150. (doi:10.1038/s41467-021-21009-6)

Isaac, A., B. Francis, R.I. Amann, S.A. Amin. (2021). Tight Adherence (Tad) Pilus Genes Indicate Putative Niche Differentiation in Phytoplankton Bloom Associated Rhodobacterales. Front. Microbiol. 12:718297. (doi:10.3389/fmicb.2021.718297)

Prass, M., M.O. Andreae, A.C. de Araùjo, P. Artaxo, F. Ditas, W. Elbert, J.D. Förster, M.A. Franco, I.H. de Angelis, J. Kesselmeier, T. Klimach, L.A. Kremper, E. Thines, D. Walter, J. Weber, B. Weber, B.M. Fuchs, U. Pöschl, and C. Pöhlker. (2021). Bioaerosols in the Amazon rain forest: temporal variations and vertical profiles of Eukarya, Bacteria, and Archaea. Biogeosciensces 18:4873-87. (doi:10.5194/bg-18-4873-2021)

Klassen, L., X. Xing, J.P. Tingley, K.E. Low, M.L. King, G. Reintjes, D.W. Abbott. (2021). Approaches to Investigate Selective Dietary Polysaccharide Utilization by Human Gut Microbiota at a Functional Level. Front. Microbiol. 12. (doi:10.3389/fmicb.2021.632684)