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Publications 2023

Lu, D.-C., F.-Q. Wang, R.I. Amann, H. Teeling and Z.-J. Du. (2023). Epiphytic common core bacteria in the microbiomes of co-located green (Ulva), brown (Saccharina) and red (Grateloupia, Gelidium) macroalgae. Microbiome. 11:126. (doi.org/10.1186/s40168-023-01559-1)
Giljan, G., S. Brown, C.C. Lloyd, S. Ghobrial, R. Amann, and C. Arnosti. (2023). Selfish bac­teria are act­ive throughout the wa­ter column of the ocean. ISME com­mun. 3:e11.(doi:10.1038/s43705-023-00219-7)
Dede, B., T. Priest, W. Bach, M. Walter, R. Amann, and A. Meyerdierks. (2023). High abund­ance of hy­dro­car­bon-de­grad­ing Alcanivorax in plumes of hy­dro­therm­ally act­ive vol­ca­noes in the South Pa­cific Ocean. ISME. 17:600-10. (doi:10.1038/s41396-023-01366-4)
Rossello-Mora R., K.T. Konstantinidis, and R. Amann. (2023). Ed­it­or­ial: How Sys­tem­atic and Ap­plied Mi­cro­bi­o­logy will deal with two no­men­clature codes (ICNP and Se­q­Code) for proka­ryotes, and which clas­si­fic­a­tion stand­ards are re­com­men­ded for new taxa de­scrip­tions. Syst. Appl. Mi­cro­biol. 46:126371. (doi:10.1016/j.syapm.2022.126371)
Reintjes, G., A. Heins, C. Wang, and R. Amann. (2023). Abund­ance and com­pos­i­tion of particles and their at­tached mi­cro­bi­o­mes along an At­lantic Me­ri­di­onal Tran­sect. Front. Mar. Sci. 10:1051510. (doi:10.3389/fmars.2023.1051510)
Viver, T., R.E. Conrad, M. Lucio, M. Harir, M. Urdiain, J.F. Gago, A. Suárez-Suárez, E. Bustos-Caparros, R. Sanchez-Martinez, E. Mayol, F. Fassetta, J. Pang, I.M. Gridan, S. Venter, F. Santos, B. Baxter, M.E. Llames, A. Cristea, H.L. Banciu, B.P. Hedlund, M.B. Stott, P. Kämpfer, R. Amann, P. Schmitt-Kopplin, K.T. Konstantinidis, and R. Rossello-Mora. (2023). De­scrip­tion of two cul­tiv­ated and two un­cul­tiv­ated new Sa­lin­i­bac­ter spe­cies, one named fol­low­ing the rules of the bac­teri­olo­gical code: Salinibacter grassmerensis sp. nov.; and three named fol­low­ing the rules of the Se­q­Code: Salinibacter pepae sp. nov., Salinibacter abyssi sp. nov., and Salinibacter pampae sp. nov. Syst. Appl. Mi­cro­biol. 46:126416. (doi:10.1016/j.syapm.2023.126416)
Sidhu, C., I.V. Kirstein, C.L. Meunier, J. Rick, V. Fofonova, K.H. Wiltshire, N. Steinke, S. Vidal-Melgosa, J.-H. Hehemann, B. Huettel, T. Schweder, B.M. Fuchs, R.I. Amann, and H. Teeling. (2023). Dis­solved stor­age glycans shaped the com­munity com­pos­i­tion of abund­ant bac­terioplank­ton clades dur­ing a North Sea spring phyto­plank­ton bloom. Mi­cro­bi­ome. 11:77. (doi:10.1186/s40168-023-01517-x)
Orellana, L.H., K. Krüger, C. Sidhu, R. Amann. (2023). Com­pa­ring ge­no­mes re­co­ve­r­ed from time-se­ries me­ta­ge­no­mes using long- and short-read se­quen­cing tech­no­lo­gies. Mi­cro­bio­me 11:105. (doi:10.1186/s40168-023-01557-3)
Brüwer, J.D., H.L. Orellana, C. Sidhu, H.C.L. Klip, C.L. Meunier, M. Boersma, K.H. Wiltshire, R. Amann, B.M. Fuchs and J.-B. Raina. (2023). In situ cell di­vi­si­on and mor­ta­li­ty ra­tes of SAR11, SAR86, Bacteroidetes, and Aurantivirga du­ring phy­to­plank­ton blooms re­veal dif­fe­ren­ces in po­pu­la­ti­on con­trols. mSys­tems, En­vi­ron. Mi­cro­bi­ol. 8:e01287-22. (doi:10.1128/msystems.01287-22)
Priest, T., W.-J. von Appen, E. Oldenburg, O. Popa, S. Torres-Valdés, C. Bienhold, K. Metfies, W. Boulton, T. Mock, B.M. Fuchs, R. Amann, A. Boetius, M. Wietz. (2023). At­lan­tic wa­ter in­flux and sea-ice co­ver dri­ve ta­xo­no­mic and func­tio­nal shifts in Arc­tic ma­ri­ne bac­te­ri­al com­mu­nities. ISME J. on­line. (doi:10.1038/s41396-023-01461-6)

Sun, C.-S., L.-Y. Zhou, Q.-Y. Liang, X.-M. Wang, Y.-X. Lei, Z.-X. Xu, F.-Q. Wang, G.-J. Chen, Z.-J. Du and D.-S. Mu. (2023). Short-chain fatty acids (SCFAs) as potential resuscitation factors that promote the isolation and culture of uncultured bacteria in marine sediments. Mar. Life Sci. Tech. 5:400-14. (doi:10.1007/s42995-023-00187-w)

Priest T., S. Vidal-Melgosa, J.-H. Hehemann, R. Amann and B.M. Fuchs. (2023). Car­bo­hy­dra­tes and car­bo­hy­dra­te de­gra­da­ti­on gene ab­un­dance and tran­scrip­ti­on in At­lan­tic wa­ters of the Arc­tic. ISME Com­mun. 3:130. (doi.org/10.1038/s43705-023-00324-7)

Rodriguez-R, L.M., R.E. Conrad, T. Viver, D.J. Feistel, B.G. Lindner, S.N. Venter, L.H. Orellana, R. Amann, R. Rossello-Mora, K.T. Konstantinidis. (2023). An ANI gap wi­t­hin bac­te­ri­al spe­cies that ad­van­ces the de­fi­ni­ti­ons of in­tra-spe­cies units. mBio 15:e02696-23. (doi:10.1128/mbio.02696-23)

van Erk, M.R., O.M. Bourceau, C. Moncada, S. Basu, C.M. Hansel and D. de Beer. (2023). Reactive oxygen species affect the potential for mineralization processes in permeable intertidal flats. Nat. Commun. 14:938. (2023). (doi:10.1038/s41467-023-35818-4)

Liu, Y., T. Brinkhoff, M. Berger, A. Poehlein, S. Voget, L. Paoli, S. Sunagawa, R. Amann and M. Simon. (2023). Me­ta­ge­no­me-as­sem­bled ge­no­mes re­veal great­ly ex­pan­ded ta­xo­no­mic and func­tio­nal di­ver­si­fi­ca­ti­on of the ab­un­dant ma­ri­ne Roseobacter RCA clus­ter. Mi­cro­bio­me 11:265. (doi:10.1186/s40168-023-01644-5)

 

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