05.11.2012 Strange diet for methane consuming microbes

Strange diet for methane consuming microorganisms
Methane supplies the energy but is not the carbon source

Methane is formed under the absence of oxygen by natural biological and physical processes, e.g. in the sea floor. It is a much powerful green house gas than carbon dioxide. Thanks to the activity of microorganisms this gas is inactivated, before it reaches the atmosphere and unfolds its harmful effects on Earth´s climate. Researchers from Bremen have proven that these microorganisms are quite picky about their diet. Now they have published their results in the Proceedings of the National Academy of Sciences (PNAS).

Matthias Kellermann (left) and Gunter Wegener discussing the strategy. (Photo: Kai-Uwe Hinrichs)

Excellent mood despite arctic temperatures in the cold room. Matthias Kellermann and Yu-Shih Lin wore thermo suits, as the sub tropical temperatures outside would ruin their samples. In 2000 meters the average is around 4 degrees centigrade.
(Photo: Kai-Uwe Hinrichs).

Carbon can be the basic structural element...

All life on Earth is based on carbon and its compounds. Cell components of all creatures contain carbon. The cell can take up this basic structural element via organic matter, or the cell build up its own organic matter from scratch, i.e. carbon dioxide. Researchers termed the first cells heterotrophs and the latter autotrophs. All plants, many bacteria and archaea are autotrophs, whereas all animals, including humans, are heterotrophs. The autotrophs form the basis for the life of the heterotrophs and all higher life by taking up inorganic carbon to form organic material.

…and can be the energy source

To keep the cellular systems running all cells need fuel. Methane can be such a fuel. When studying the methane consuming microbes discovered by Bremen scientists more than ten years ago it was assumed that they take the methane for filling up their energy tanks and using it as a carbon source, i.e, they were thought to be heterotrophs.

Now scientists from MARUM and the Max Planck Institute for Marine Microbiology show in their PNAS research paper that this is surprisingly not the case and the methane derived carbon is not used as a carbon source. “Our growth studies clearly show that the labeled carbon in the methane never showed up directly in the cell material, but experiments with labeled carbon from carbon dioxide did. It was quite surprising, ” said PNAS author Matthias Kellermann. The archaea in the consortia behave like it is expected for chemoautotrophs.
“Archaea and the sulfate reducing bacteria are living close together in consortia, which are growing extremely slow. And only in the newly synthesized cell material we could find the answer for the question, from where the carbon originates,” adds Kai-Uwe Hinrichs, leader of the organic geochemistry group at MARUM.

Co-author Gunter Wegener from the Max Planck Institute concludes: ”With our new knowledge we can optimize our studies about the inactivation of methane in nature. Our surprising results tell us that we still know little details of this globally important process.”


Samples were retrieved from the Guaymas Basin on the West coast of Mexico from a depth of more the 2000 meters using the US diving submersible Alvin .


Manfred Schlösser

Kai-Uwe Hinrichs preparing the sampling equipment. The gripper arm can operate the coring devices for the sediment samples. (Photo: M. Kellermann)

Further informations/ photo material/Interviews:
Dr. Manfred Schloesser, +49 421 2028704, mschloes mpi-bremen.de
Dr. Rita Dunker, +49 421 2028856, rdunker mpi-bremen.de
Albert Gerdes, +49 421 21865540, [Bitte aktivieren Sie Javascript]


Institutions

Max Planck Institute for Marine Microbiology, Bremen
MARUM – Center for Marine environmental Research at the University of Bremen


Original article
Autotrophy as a predominant mode of carbon fixation in anaerobic methane-oxidizing microbial communities
Matthias Y. Kellermann, Gunter Wegener, Marcus Elvert, Marcos Yukio Yoshinaga, Yu-Shih Lin,
Thomas Holler, Xavier Prieto Mollar, Katrin Knittel, and Kai-Uwe Hinrichs
PNAS doi/10.1073/pnas.1208795109